Panicum virgatum (switchgrass): 120658122
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Entry
120658122 CDS
T07260
Name
(RefSeq) calcium-dependent lipid-binding protein-like isoform X1
KO
K28063
extended synaptotagmin
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120658122
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
120658122
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2
SMP_LBD
SMP_MUG190-like
DUF7488
Motif
Other DBs
NCBI-GeneID:
120658122
NCBI-ProteinID:
XP_039792269
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Position
2N:15284438..15302049
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AA seq
499 aa
AA seq
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MGLISGMVMGVLVGVAIMAGWSRVMLRRSRKRIAKAADIKVLGSLGRDDLRKLCGDNFPE
WISFPQFEQVKWLNKHLSKLWPFVAEAATAVVKESVEPLLDDYRPPGIKSLKFSKFSLGT
VSPKIEGIRIQNLQPGQIIMDIDFRWGGDPSIILAVDAVVASLPIQLKDLRVYTIIRVVF
QLSEEIPCISAVVVALLADPEPKIQYTLKAIGGSLTAVPGLSDMIDDTVNSIVSDMLQWP
HRLVVPLGVNVDTSDLELKPQGKLSVTVVKATSLKNKELIGKSDPYVKLYVRPMFKVKTK
VIDDNLNPEWNETFELIVEDKETQSVIFEVYDEDKLQQDKRLGVAKLALNSLEPEITREV
TLKLLHSVDPLKNRDTKDRGTLHLKVMYHPFTKEEQLEALEAEKQAIEERKRLKEAGIIG
STMDAVGGAASLVGSGVGAGVGLVGSGIGAGVGLVGSGIGAVGSGLGKAGKFMGKTVAGP
FSMSRKNGSSSAAPQPDQA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggggctcatctccgggatggtgatgggggtgctggtcggcgtggccatcatggccggc
tggagccgcgtcatgctccggcgcagcaggaagcgcatcgccaaggccgcggatatcaag
gtgctcgggtctctcggcagggacgacctcaggaagctgtgcggcgacaacttccccgag
tggatatccttcccgcagtttgagcaggtgaaatggctgaacaagcatctaagcaaactt
tggccatttgttgcagaagctgcaacagcagtggttaaggagtccgttgaaccactgcta
gatgattaccggcctccaggaataaaatctctgaagttcagcaaattttctctgggaacc
gtgtcaccaaaaatagaaggtattcgtattcaaaatcttcagccaggccaaatcataatg
gatatagatttccgttggggtggtgatccaagcataatcctagctgttgatgctgtagtt
gcatcactacctattcagctcaaggatcttcgggtctatactatcatacgtgttgtgttt
caactgtcagaagagattccttgcatatctgctgttgtggtggctctccttgctgatcca
gagccaaaaattcagtacaccctgaaggccattggaggaagcctaaccgcagttcctgga
ctttctgacatgattgatgatactgtcaactcaattgtttctgatatgctccagtggcca
cacaggctagttgttccacttggtgttaatgttgatacaagtgatctggagcttaaacct
cagggaaaactttctgttactgtggtaaaagcaacttctttgaaaaacaaggagttgatt
ggtaaatcagatccttacgtgaaactgtatgtgcgaccaatgtttaaagtcaaaacaaaa
gtcatagatgacaacctgaatccagaatggaatgaaacatttgagctgattgtcgaagac
aaagaaacccaatctgtcatttttgaggtttacgatgaagacaaacttcagcaagacaaa
agacttggtgtggctaaactagcactgaacagtcttgaacctgagatcacccgtgaagtc
actctgaagctgctgcattcagtagatccacttaaaaatagggataccaaggatagaggc
acattgcatcttaaggtcatgtatcatccgtttacaaaagaagagcaacttgaagcccta
gaggcggaaaagcaagccatagaagagaggaagcgtctgaaggaggctgggataattggt
agcacaatggatgcagttggtggcgctgcatcactagttggttctggtgttggcgctggc
gtggggcttgttggatctggtattggtgctggcgtcgggcttgttggctctggtattggt
gcagtcggcagtggccttggtaaagccggaaagttcatgggcaagactgtggcagggcct
ttcagcatgtcccgcaagaacggcagcagctctgctgctccccagcctgatcaagcgtag
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