Panicum virgatum (switchgrass): 120658511
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Entry
120658511 CDS
T07260
Name
(RefSeq) exportin-T-like
KO
K14288
exportin-T
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120658511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120658511
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120658511
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-T
Xpo1
Motif
Other DBs
NCBI-GeneID:
120658511
NCBI-ProteinID:
XP_039792695
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All DBs
Position
2N:65347678..65357256
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AA seq
977 aa
AA seq
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MDDLEQAILLASDSAAAAASPPVRAEALAFCARARDESPPSSLLRLCLSGLASSPHTQVH
FWCLQSLHDALLHRRLVLPDDLALLRSSLLSLAVSSHAASPPFLRNKLAQLVALLIRLDY
PHVYPSYFLDLLPPAPPQPGLTDMFARVLISLDDDLLSQEYPRSADEATDSMWVKDSMRA
QCVPQIARHWHAAASTLRTADPAAAAVALDAARRCISWIDVGLVANDVFVPLLFDIAMSP
GSAAPLAAAAVGCLAAVAAKRMDARAKVGLLRSLLVAQQALGSPDSGLKMAPLVTTYAAE
ALECYRRLGASDADGAAALEMLEEVLPAVFAAAETSDDEEVDAGSVLEFLSGYVSMMKAP
SEKQLGHLGRILEVVRVQMSYDPVYREHLDVLDKIGKEEEDLKVEQRKDLIALFRSICRV
APAAAQLFIRGLLVTALSSAEASVEDVEVALTLFYRLGEAVGEEEIRTGTGLLGELVPML
LAARFSCHTHRLVALVYLETVTRYMKFMQEHVQYVPHLLGVFLDNRGIHHQNAHVSRRAG
YLFMRAVKLLKAKLVPYLDTILQSLQDVLSQFTSMDWANKDAKFPSSEDGSQIFEAVGLL
ISIEEVSPEMQAQYLTALLNPLCHQIESLVMDAKAQGLEESSPRAISLQQIIVALNMVSK
GFNERLVMGNRPAIGVMFKKTLDVVLQVIVSFPNVKPLRSKVISFLHRMIEILGTPVLPY
IPIALRQLLLDNEAKDMVEFLVLVNQIICKFKSSASTILEEIFPTIASHLSVILSQDAFS
AGPASNTEEMRELQELQRTLYTFLHAMATHDLSTILLTPSCVQYLDTIMQLLLFTSCKHK
DILLRKACVQIFVNLVKDWCTNSEDKITGFREFMIEKFATNCCLYSVLDKSFDLRDANSL
VLFGEIVVAQKIMYERFGDVFIKKFVETDLTKVCCPPDLAKQYCQKLQGNDIKAFRSFYQ
SLIEKLRPLGNGSLVFR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctcgagcaggccatcctgctggcttccgactccgccgccgccgcggcgtcc
cctcccgtccgcgcggaggcactcgccttttgcgcccgcgcccgcgacgagtccccgccg
tcgtcgctcctccgcctctgcctatccggcctcgcctcctccccgcacacgcaggtccac
ttctggtgcctccagtcccttcacgacgcgctcctccaccgccgcctcgtgctcccagac
gacctcgcgctgctccgctcctcgctcctctcgctagcggtttcctcacacgccgcgtcg
ccgccgtttctccgcaacaagctcgcccagcttgttgcgctcctcatccgactcgattac
ccccatgtctacccctcctatttcctggacctcctccctcccgcgccgccgcagccgggc
ctgacggacatgttcgcgagggtcctcatctccctcgacgacgacctgctctctcaggag
taccctcgcagtgccgacgaggctaccgactctatgtgggtgaaggattctatgcgcgcg
cagtgtgtgccccagatcgcccgccactggcacgcagccgcctcgacactccgtacagct
gatcctgccgctgcagcggtagcccttgacgcggcgcgcagatgcatctcgtggatcgat
gtcggactggtggctaacgatgtgtttgttcctctactctttgacattgcaatgtcacct
ggaagcgcagctccgcttgctgctgctgcagtggggtgcctcgctgctgtggcagcgaag
aggatggacgcaagggcgaaggtgggattgctgaggtcgctcctggttgcacagcaagca
ctcggtagcccagacagcggattaaagatggcacccttggtaacaacatatgctgcagag
gcccttgaatgttatcggaggcttggcgctagtgacgctgatggagctgcagctttggag
atgctggaagaggtgctgccggctgtatttgcagctgcagagacctccgatgatgaagag
gtggatgcgggttccgtccttgagttcttatctggctatgtaagcatgatgaaggcaccg
tctgagaagcagttgggacacttgggacggatcctggaggtggtacgggtgcagatgtca
tatgatccagtatatagggagcatcttgatgtgcttgacaagatagggaaggaggaggag
gatctcaaggtagagcaacggaaggatttgattgcattgttccggagcatttgtcgtgta
gcgccagctgctgctcagctgttcataagagggttgcttgtaacagctctctcgtctgca
gaagctagcgtggaggatgttgaggtcgctcttaccctgttctaccggcttggagaagca
gtgggtgaggaagagatccggactgggacagggctgctgggggagcttgtgcccatgctc
cttgctgcgagattctcatgtcacacacaccgcttagtagcattggtttatctggagaca
gtaacccgctatatgaagttcatgcaggagcatgtgcagtatgtgccacacctgcttggt
gtgttcttggataaccgtggcatacaccatcaaaatgcccacgtgagccggcgtgcagga
tacttattcatgagggcagttaagttattgaaggcaaagctggtgccttacctggatacc
attttgcagagccttcaagatgttctaagccaattcacctctatggattgggcaaacaaa
gatgcgaagtttcccagctctgaggatggcagccaaattttcgaggctgttggattatta
atcagcattgaagaggtctcaccagagatgcaggctcagtacttgactgctctgcttaat
cctctctgtcatcagattgagtcacttgttatggatgccaaagcacaaggacttgaagaa
tcatcaccgagagccattagtcttcaacagattattgttgcattgaatatggtcagcaag
ggctttaatgagcgccttgtgatgggaaataggccagctattggggtgatgttcaagaaa
acccttgatgttgttttgcaagtcatcgtctcatttcctaatgtgaaacctctgcgatct
aaggtcatatcctttctgcatcggatgattgagatattaggtaccccagtgcttccatat
atcccaatcgcactgcgacaattgcttcttgataatgaggctaaagatatggtggagttt
ctcgtattggtaaaccaaataatctgcaaattcaaatcgtcagctagcactatattggaa
gaaatctttcctactattgcaagtcatttgtctgtgatactatcacaagatgcattttca
gctggtcctgcaagcaatactgaggaaatgagagaactgcaagagttgcagaggacatta
tacacattcttgcatgctatggcaacccatgatctttctacaattctccttactcctagc
tgtgtgcagtatctggatactataatgcagttgcttttatttacttcatgtaaacataag
gatatactactccgcaaggcatgtgtacaaatttttgtgaaccttgtaaaagactggtgc
actaactctgaagataagattactggcttccgagaatttatgattgagaagtttgctact
aattgctgtttgtacagcgtccttgataaatcatttgatttacgtgacgctaattcgctt
gttctctttggtgaaattgtggtggcccaaaagattatgtatgaaagatttggggatgtc
ttcattaagaagtttgtagaaactgatcttacgaaagtttgttgcccaccagacctagct
aaacagtactgccagaagttacagggaaatgatatcaaggcattcaggtcattttatcaa
tcgcttatcgagaaattaagaccgctagggaatgggagtcttgtattcagatag
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