Panicum virgatum (switchgrass): 120661163
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Entry
120661163 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120661163
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120661163
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
120661163
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
Motif
Other DBs
NCBI-GeneID:
120661163
NCBI-ProteinID:
XP_039795826
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All DBs
Position
2N:52360088..52362476
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AA seq
321 aa
AA seq
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MAAAAATAGDRRRRSRAPAGGAAAGNDDAEEQHLNPFLDAAPSASSRVQFSGGRRNVASR
ARRVEEAGAAEVVESKGKLWMTTGVTRGGKLCYNIEETGFLVERRALILLNDKQHVRLAG
EAAGWSWFRLAPVRRWLELLIGWCSSPATDAQTNRAKDETIGIEAIYEKIAGGKYGCSWD
AFQAYKHLKSLGYIVGRFGVPWTMKHSGTCDTTVPPSVVHPDQSFNRVDGTCNEITKLLK
EMHIDEISPSFEVYLPNSKFKKSSPGAPSFLLYLLRNKPPSRVELEMVENNFGTIPLKYC
RVDNGRVSFLSFDKVVLPSLP
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctgctgcgaccgctggcgaccgccgcaggaggagccgcgctccagcgggt
ggcgccgccgccggaaacgatgatgccgaggagcagcatctcaaccccttcctggacgca
gctccatccgcctcctcgagggtccagttcagcggcgggcgcaggaatgtggcctcacgc
gcgcggcgggtggaagaggccggtgccgcagaggtggtggagagcaagggcaagctgtgg
atgaccaccggcgtcacccggggcggcaagctgtgctacaacatcgaggagaccgggttc
ttggttgaaaggcgtgccttgattcttctcaatgacaagcagcacgttcggcttgctgga
gaagcagccggctggagctggttccggctggcacccgttcggcggtggctggagctgctc
attggctggtgctccagcccagccacagatgcccaaacgaacagggcgaaggatgaaacg
ataggaatagaagccatttatgaaaagattgctggaggaaaatatgggtgttcctgggat
gccttccaagcttataagcacttgaaatcgcttggttatattgttggacgattcggtgtc
ccctggacgatgaagcatagcggtacttgtgacactactgttcctcccagtgtggtgcat
cctgatcagagcttcaatagagtcgatggcacctgcaatgagataaccaaattgctgaag
gaaatgcacattgatgagatatctccatcctttgaagtgtatttgcctaacagcaagttc
aaaaagtcatccccaggagcccctagtttcctcttatatctgttaaggaataagcccccc
tcaagggttgaattggaaatggtggaaaacaattttgggactattcctctgaaatattgc
cgtgtggataatgggcgggtcagctttctttccttcgacaaggttgtccttccaagcttg
ccctga
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