Panicum virgatum (switchgrass): 120662164
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Entry
120662164 CDS
T07260
Name
(RefSeq) pectinesterase-like
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00040
Pentose and glucuronate interconversions
pvir01100
Metabolic pathways
Module
pvir_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120662164
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
120662164
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Motif
Pfam:
Pectinesterase
PMEI
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
120662164
NCBI-ProteinID:
XP_039797220
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Position
2N:complement(68763912..68768809)
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AA seq
591 aa
AA seq
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MPPRSRSAAAAKLPVTATFLSLALLLLPLGFLATHRTFSGGVAESTSAAEERHRVLLAGN
DDGNADAAAAAEHAAAVDRHCACTLHRDVCASTLATIPNLARKPLRDVISDVVARAAAAV
RASSSNCSSYLRRPQGLCVRDRLALSDCLELFGSTLGQLGTAADELSAGNRTAEESIAGV
QTVLSAALTNQYTCLDGFAGPSASEDGRVRPYIQGRIYHVAHLVSNSLAMVRRLPQRRRR
GREALEGYGRVRRGFPSWVSAGDRRRLLQQQGAPPAVADLVVAKDGSGNFTTVGEAVAAA
PNNSEARFVIYIKAGGYFENVEVGPEKTNLMFVGDGMWKTVIKASRNVADNSTTFRSATL
AVVGTGFLARDLTVENASGPKKNQAVALRVNADLAAFYRCSFVGYQDTLYAHSLRQFYRD
CDVYGTVDFVFGDAAAVLQGCSLYARRPERGQKNVVAAQGRTDPNQNTGIVVQGGKVAAA
ADLIPVLANFSSYLGRPWKLYSRTVFAQTKIEGLIHPRGWLEWNGSFALDTLYYAEYMNR
GPGANTSARVAWPGYHVLTNATDAANFTVRNFIQGDLWLNSTSFPYTLGLS
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctcggtccaggagcgcagccgcagccaagctccccgtcactgccaccttcctc
tccctcgcccttctcctcctaccgctcggcttcctcgccacccacaggacattttccggt
ggcgtcgccgagtccacgtccgctgcagaggaacgtcaccgtgtgcttcttgcgggtaat
gacgacggcaatgccgacgccgccgccgcggcggagcacgcggccgccgtggaccggcac
tgcgcctgcacgctgcaccgcgacgtgtgcgcgtcgacgctcgccaccatcccgaacctc
gctcggaagccgctgcgggacgtgatctccgacgtggtggcgcgcgctgcggcggcggtg
cgcgcgtcctcgtccaactgctcgtcctacctccgccggccccagggcctgtgcgtgcgc
gaccgcctggcgctgtccgactgcctggagctgttcgggagcacgctggggcagctgggc
acggcggcggacgagctgtcggcggggaaccgcacggcggaggagtccatcgcgggcgtc
cagaccgtgctctcggccgcgctgacgaaccagtacacctgcctggacgggttcgcgggc
ccgtcggcgtcggaggacgggcgcgtccggccctacatccagggccgcatctaccacgtg
gcccacctggtgtccaactccctggccatggtgcggcgcctcccgcagcgccggcggcgc
gggcgcgaggcgctggaggggtacgggcgggtgcggcgcgggttcccgtcgtgggtgtcg
gcgggggaccggaggcggctgctgcagcagcagggcgcgccgccggcggtcgcggacctg
gtggtggccaaggacgggagcggcaacttcacgacggttggggaggcggtggcggcggcg
cccaacaacagcgaggcgcggttcgtgatctacatcaaggcaggcgggtacttcgagaac
gtggaggtcgggccggagaagacgaacctgatgttcgtcggcgacggcatgtggaagacg
gtgatcaaggccagccgcaacgtcgccgacaactccaccaccttccgctccgccacgcta
gcggtggtcggcacggggttcctggcgcgcgacctgacggtggagaacgcgtcggggccc
aaaaagaaccaggccgtggcgctgcgcgtcaacgccgacctcgccgccttctaccgctgc
agcttcgtggggtaccaggacacgctctacgcccactccctccgccagttctaccgcgac
tgcgacgtctacggcaccgtcgacttcgtcttcggcgacgccgccgccgtgctccagggc
tgcagcctctacgcgcgccgcccggaacgcggccagaagaacgtcgtcgccgcgcagggc
cggacggaccccaaccagaacacgggcatcgtcgtgcagggcggcaaggtcgccgccgcc
gccgacctcatccccgtcctcgccaacttctcctcctacctcggccggccatggaagctc
tactcgcggacggtgttcgcgcagaccaagatcgagggcctcatccacccgagggggtgg
ctcgagtggaacgggagcttcgcgctcgacacgctctactacgccgagtacatgaaccgt
gggcccggcgccaacacgtcggcgagggtggcctggcccggctaccacgtgctcaccaac
gccaccgacgccgccaacttcaccgtgcgcaactttattcagggcgacctctggctcaat
tccacctccttcccctacacgttgggcttgagctag
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