Panicum virgatum (switchgrass): 120665641
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Entry
120665641 CDS
T07260
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic-like isoform X1
KO
K03768
peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:
5.2.1.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120665641
Enzymes [BR:
pvir01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
120665641
Chaperones and folding catalysts [BR:
pvir03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
120665641
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
120665641
NCBI-ProteinID:
XP_039801198
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Position
3N:complement(30363231..30369380)
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AA seq
326 aa
AA seq
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MALPSSSIRAASSTVYPAYLGLHQNPNSHHAPFRPSKTNHANTCKCIESPKIARRSLFFL
PATFLLLHTSSSLAVDDTNMSSTLAIDTTITDRIFMDFSVCPSYFRSDRPLGAELSSCPD
SEPFGRVVFGLYGRLLPITVANFKATCTAAAYRGTLVHKLLQGQFFSAGRQGFRRDKGEV
QPPSGLIRNSETVNPKAFKLRHARPGTLSLCLGENDDDDDIKLNPNYHNVEFLVTTGPGP
CPELDGQNIVFGTVLEGMDVITSIATIPTYKPAERIRFFNDFAQLIGDERAQTARALWDR
PLKTVYISDCGELKVTKQSLSPPSLP
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcattaccttcatcaagcatcagagctgcatcctccacagtttaccctgcctatctt
ggcctacaccaaaaccccaacagccaccatgctccttttcgtccttcaaaaacaaaccat
gccaatacctgtaaatgcatcgagtcacccaaaattgctagacgatctctcttcttccta
cccgccacctttcttctccttcacacttcctcctcccttgctgtagatgacacaaacatg
tcatccaccttagcaattgacacaacgatcacagatcgcatcttcatggactttagtgtc
tgtccaagctactttcgttctgacagacctttaggagctgagctttcctcatgccctgac
tctgagccatttggtcgtgttgtctttggtctttatggtcggcttctccccattactgtt
gccaatttcaaagctacatgtactgcagctgcatataggggcactcttgtccacaagctc
cttcaaggacaatttttttctgctggccgacaaggctttcggcgtgacaagggtgaagtc
cagcctccctcaggcctcattaggaattctgagactgtcaatcctaaagcattcaaacta
aggcatgcaagacctggtacactttccttgtgcctcggagagaatgatgatgatgatgac
atcaagctcaatcccaattatcacaatgttgaattcttggttaccacagggccaggaccc
tgcccagagcttgatggccaaaacattgtctttggaactgtattggaaggaatggatgtt
atcaccagcattgcaaccatacctacctacaaaccagctgaaaggatccgcttcttcaat
gactttgcacagttgattggtgacgaaagagctcaaactgctcgggcattgtgggatcgc
ccacttaagactgtatatatcagcgactgcggggagctaaaagtgaccaaacaatctctt
tcccctccaagcttaccatga
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