Panicum virgatum (switchgrass): 120673190
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Entry
120673190 CDS
T07260
Name
(RefSeq) actin-related protein 2/3 complex subunit 2A-like
KO
K05758
actin related protein 2/3 complex, subunit 2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
pvir04517
IgSF CAM signaling
pvir05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120673190
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120673190
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120673190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120673190
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120673190
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Arp2/3 complex
120673190
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
120673190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P34-Arc
Trns_repr_metal
Motif
Other DBs
NCBI-GeneID:
120673190
NCBI-ProteinID:
XP_039809862
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All DBs
Position
5N:49461963..49468988
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AA seq
320 aa
AA seq
DB search
MILLQSPSRFLLQTLQDRVLSGEKGMDIDCHTVEFDDVRYHIQFSMRNPKVMVLSVALPL
PSPEAILCDGLPLGAIEAIKAAYGPVVQILDPPKDGFDLTMKINLTKLPSDEEQRNAILT
QIASVREVVLGAPLKILLKHLASKTVAPNVDKLVALVHRPNESFFLAPQADKVTIVYPMR
FQDSIDIVLATSFLQEFVEARRTAALNNVPSCMWSPAAPLELKGVPAEALNANAGFVTFV
VYPRHVEGKKLDRTVWNLLTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALDRAKSDAEK
LKKLVNGGSFKRLSLKNEGN
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgatattgctccagtctccgtcgagattcctgctccagaccctgcaggaccgcgtcctc
agtggtgaaaagggcatggacatcgactgccacacggtggagttcgacgacgtgcggtat
catatccagttttctatgaggaatccaaaggttatggtgctatcagttgctttgccgctc
ccatctcctgaagcgattctgtgtgatgggcttccacttggtgccattgaagctataaag
gcagcatatgggccggttgtgcaaattcttgatcctccaaaggatgggtttgatctcacg
atgaagataaacttgacaaagcttccgtcagatgaagaacaaagaaatgctatcttgaca
caaattgcatctgttagagaggttgtgctgggtgcaccactgaagattctgctgaaacat
ttagcctcgaagacagtagctcctaatgttgacaagcttgttgctcttgttcaccgtcct
aatgaatcctttttcctcgctccccaggcagataaagttactattgtgtacccaatgaga
tttcaggactccattgatattgttttagcaacatcattcctgcaggaatttgtggaggca
agacgaactgctgcacttaataatgttccttcttgtatgtggtctccggcagctcctctt
gagttaaaaggggtacctgctgaggcactgaatgcaaatgctggctttgttacttttgtt
gtttaccctcggcatgttgagggtaaaaagctagacagaacggtttggaatttgctaaca
tttcatgcttatgtaagctatcatgtaaagtgttccgaaggattcatgcataccaggatg
aggcgcagggttgagtcgctgatccaggctttggaccgagcgaagtctgacgcggagaag
ctgaagaagttggtcaatggcggatccttcaaaagactgagcctgaagaatgaagggaat
tga
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