Panicum virgatum (switchgrass): 120673553
Help
Entry
120673553 CDS
T07260
Name
(RefSeq) probable transcription factor GLK2
KO
K28172
GARP family transcription factor, GLK subfamily
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120673553
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
120673553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
120673553
NCBI-ProteinID:
XP_039810378
LinkDB
All DBs
Position
5N:639289..643894
Genome browser
AA seq
476 aa
AA seq
DB search
MLEVSSLRSPSKVDHQRGFVGDHVVFPTSGSVCDDFMVDDNLLDYIDFSCDVPFFDADGD
ILPDLEVDPTELLAEFSSPETSPTEADGCRVEAKPPDDLRQALAAAEEEAVTTSTTVEEK
KADEIINRRMLLGNDDDKLAAASGSGVTTTRKSVDAEGSSAVTTEEDSAGAGSDTKSSSA
SAGGHCGKKKAADKNSSNGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDC
LTRHNIASHLQKYRSHRKHLMAREAEAASWAQKRHHMYAPAPARKLDAAAAAGGPWVVPT
LGFPPPPPPLCRPLHVWGHPPTAGVEAAAPPPAMLPVWARHLAPPRPWAPPVAYWHLQQQ
QYNAARKWGGPHQAAAAAVTPAMVPRFPVPPHPHPATMYRPPMVVPPPPTTTTTKLADLQ
LQLDAHPSKESIDAAIGDVLVKPWLPLPLGLKPPSMDSVMSELHKQGIPKVPPSSA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaggtgtcgagccttcggagccctagcaaggtggatcatcagcgcgggttcgtc
ggcgaccatgtcgtgttcccgacgtccggcagcgtctgcgacgacttcatggtcgacgac
aacctgctggactacatcgacttcagctgcgacgtgcccttcttcgacgccgacggggac
atcctccccgacctcgaggtggacccgacggagctcctcgccgagttctcctccccggag
acgagcccgacggaggcagacggctgtcgcgtggaggccaagccgccggacgacctacgg
caagcactagcagccgcagaggaagaagcagtgacgacatcgacgacagtagaagagaag
aaagcagacgagatcatcaacaggaggatgttgctgggaaatgacgacgacaaattagca
gccgcatcaggttcaggtgtgacgacgacgaggaagagcgtggatgctgaggggtcgagc
gcggtgacaacggaggaggattccgccggcgccgggtcggacaccaagtcgtcgtcggcg
tcggcggggggccactgcggcaagaagaaggcggcggacaagaactcttccaacggcaag
cggaaggtgaaggtggactggacgccggaattgcaccggcggttcgtgcaggcggtggag
cagcttggcatcgacaaggctgtgccctcccggatcctggagatcatggggatcgactgc
ctcacacgccacaacatcgccagccacctccagaagtaccggtcccacaggaagcacctg
atggcgcgggaggcggaggccgcgagctgggcgcagaagcgccaccacatgtacgcgccg
gctccggcgaggaagctggacgcggcggcggcggcgggaggcccgtgggtggtgccgacc
ctcgggttcccgccgccgcctccgcccttgtgccggccgctgcacgtgtggggccacccg
cccaccgcaggcgttgaggcagccgctcctcctccggcgatgctgcccgtgtgggcgcgg
cacctcgcgccgccccggccgtgggcgccgccggtggcctactggcacctgcagcagcag
cagtacaatgcggccaggaagtggggcggtccacatcaggcggcagcagcagcagtgacg
cccgccatggtgccgaggttcccggtgccgccgcacccgcacccggccaccatgtacaga
ccacccatggtcgtccctccgccgccgacgaccaccaccaccaagctcgccgacttgcag
cttcagctcgacgcgcacccgtccaaggagagcatcgacgcggccattggagatgtttta
gtgaagccatggctgccgctgccgctggggctcaagccgccctccatggacagcgtcatg
tcggagctgcacaagcaaggcataccaaaggtcccaccctccagcgcctga
DBGET
integrated database retrieval system
