Panicum virgatum (switchgrass): 120675101
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Entry
120675101 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 42-like
KO
K26938
MATE family, citrate exporter
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120675101
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120675101
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120675101
NCBI-ProteinID:
XP_039812125
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Position
5N:68430492..68433715
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AA seq
591 aa
AA seq
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MEEHQSAAHATPEAEQMPPPPPEQKQPQVVLAVAVAPAAAENGEGPAEGGHGSPAAKMET
ALLGGPRRTGLHLFVMNLRSVFKLDELGAEVLGIAVPASLALTADPLASLIDTAFIGRLG
SVEIAAVGVAIAVFNQVMKVCIYPLVSVTTSFVAEEDSILSKDGAKVVDEEGEEKDPDQH
AAVAATDPEKQQSAEEATKNNGDSNAEPGDASPAELAVAEGCAPAVVRRKSSKKRRFVSS
VTSALIVGAFLGLFQTVLLVAAGKPLLRLMGVKSGSSMVIPALRYLTLRALGAPAVLLSL
AMQGVFRGFKDTKTPLYATLAGDLANIVLDPILIFGCRMGVVGAAIAHVLSQYLITLIML
SKLVRKVDVVPPSLRCLKFRRFLGCGFLLLGRVVAVTFCVTMAASLAARHGPTAMAAFQI
CSQVWLATSLLADGLAVAGQAMIASAFARKDHYKVAATTARVLQLGVVLGAALTVILGLG
MQFGAGVFTKDAAVIRTVQKGVPFVAGTQTLNTLAFVFDGINFGASDYAFSAYSMVGVAA
VSIPSLILLSAHGGFVGIWIALTIYMSVRALASTWRHVAGSQGPWIIVGRA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacaccagtcagctgctcacgccactcctgaggccgagcagatgccgcctcct
ccaccggagcagaagcagccgcaggtggtgctggcggtggccgtcgctccggctgcggca
gagaacggtgagggtccggccgagggcgggcacggctctccggcggcgaaaatggagacc
gcattgctcggcgggccgcggcggacggggctgcaccttttcgtcatgaacctcaggagc
gtgttcaagctcgacgagctcggcgccgaggtgctgggcatcgccgtgccggcgtcgctg
gcgctcacggccgacccgctcgcctcgctgatcgacacggccttcatcggccggctgggg
tccgtggagatcgcggccgtcggggtcgccatcgccgtgttcaaccaggtcatgaaggtg
tgcatctaccctctcgtcagcgtcaccacgtccttcgtcgccgaggaggactccatcctc
agcaaagacggcgccaaggtcgtcgacgaagaaggagaagagaaagatccagatcagcac
gctgctgttgccgccacggacccggagaagcaacagtcagctgaagaagccaccaagaac
aacggcgactccaacgctgagcccggcgacgcgtcgccggccgagctcgccgtggccgag
ggatgcgccccggccgtcgtccgcaggaagagcagcaagaaaaggaggttcgtgtcgtcc
gtgacgtcggcgctgatcgtgggcgcgttcctggggctgttccagaccgtcctcctcgtc
gccgccgggaagccgctgctgcgccttatgggcgtcaaatcgggttcgtcgatggtgatc
cccgccctgcgctacctgacgctgcgcgcgcttggtgccccggccgtgctcctctctctc
gccatgcaaggcgtcttccgaggcttcaaggacaccaagacgcctttatacgccaccttg
gccggcgacctggcgaacatcgtgctggatccgatcttgatatttggctgccgcatgggc
gtggtcggcgccgccatcgcccatgttctctctcagtacctgataactctgataatgctg
agcaagctggtgaggaaggtcgatgtcgtgccgcccagcctgagatgcctcaaattccgc
cgtttcctcggatgcgggttccttctgctgggcagggtggtggccgtgacgttctgcgtg
acgatggcggcgtcgctggccgctcgccacgggccgaccgccatggcggcgttccagatc
tgctcccaggtctggctggccacgtccctcctcgccgacgggctcgccgtcgcgggccag
gccatgattgcgagcgccttcgccaggaaagaccactacaaggtggccgccaccaccgcc
cgtgtcctgcagctcggcgtcgtcctgggcgccgccctcacggtcatcctcgggctcggt
atgcagttcggcgccggcgtcttcaccaaggacgctgccgtcatcaggaccgtccagaag
ggcgttccgttcgtcgccggcacgcagacgctcaacacgctggccttcgtcttcgacggc
atcaacttcggggcgtccgactacgccttctccgcctactccatggtcggcgtggcggcc
gtgagcatcccgtcgctgatcctcctctcggcgcacggcggcttcgtcgggatctggatc
gcgctcaccatctatatgagcgtcagggcccttgccagcacctggaggcatgtggccggc
agccaggggccgtggatcatcgtggggcgcgcc
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