Panicum virgatum (switchgrass): 120675361
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Entry
120675361 CDS
T07260
Name
(RefSeq) methionyl-tRNA formyltransferase-like
KO
K00604
methionyl-tRNA formyltransferase [EC:
2.1.2.9
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00970
Aminoacyl-tRNA biosynthesis
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120675361
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.9 methionyl-tRNA formyltransferase
120675361
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GFIT
Motif
Pfam:
Formyl_trans_N
Formyl_trans_C
Motif
Other DBs
NCBI-GeneID:
120675361
NCBI-ProteinID:
XP_039812498
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Position
5N:51982467..51986405
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AA seq
360 aa
AA seq
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MARYSPPLLRRFFSCAATSASPAGGSGAGKKNLVFLGSPQVAASVLDTLLAASGSPDSGF
QVAAVVTQPPAAKNRGRKLMPSAVAQLALERGFPEELIFTPEKAREESFLSDLKEVKPDV
CITAAYGNILPQKFLDIPPCGTVNIHPSLLPLYRGAAPVQRALQDGVAETGVSLAYTVCA
LDAGPVIACERFPVDEYIKAPELLATLFDIGSKLLVNELPSILDGSAKEKAHPQDDSEAT
LAPKLNSEESWLSFDQEAKEIHNKVRAFSGWPGTRAKLQLINQNGEADVLEIKVISTKVS
SSFDKAGDENEILFSGSSLLIPCSGSTWLEVLELQLPGKKVTMARDFWNGLRGQKLLKSP
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggtactccccaccgctgctgcgccgcttcttcagctgcgccgccacctccgct
tcgcccgccggaggcagcggcgctgggaagaagaaccttgtcttcctgggctcgccgcag
gtggccgcctccgtcctggacacgctgctggccgcgtcgggctccccggactccgggttc
caggtagctgccgtcgtgacgcagccgccggccgccaagaacaggggtaggaagctgatg
ccgtcggccgtcgcccagcttgcgctcgagcgcggcttcccggaggaactcatcttcacg
ccagagaaggcccgggaggagtccttcctgtcggacttgaaggaagtgaaaccggatgtt
tgcataactgctgcttacgggaacattctgccccagaaatttcttgatatcccaccgtgc
ggtacagtcaatatacatccaagtttattgcctctatatcgtggtgcagctcctgtgcag
agggctctgcaggatggtgttgcagaaacaggtgtttccctcgcatatactgtttgtgcg
ttggatgcaggaccagtgattgcgtgtgaaaggtttcctgttgatgaatacattaaggca
ccagagctacttgctacattgtttgatataggatccaagctgttggttaatgaactacca
tccattcttgatggttcggctaaagaaaaggcacatccacaggatgactccgaagctacg
ctggcacccaagttaaattctgaggagtcatggctatcgtttgaccaagaggctaaagag
atccataacaaggtgcgggcattttcagggtggcctggaactcgtgcaaaattgcaactc
ataaatcaaaatggtgaagcagatgtgctagagattaaggttatcagtacgaaggtttca
tcatcatttgacaaggccggagatgaaaacgagatattattctccgggagttccttgctg
attccttgcagtggatcaacttggcttgaggtgttggaacttcagctccctggaaagaaa
gtaacaatggctcgggacttttggaatggtttgcgtggtcagaagctgttgaagtcacca
taa
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