Panicum virgatum (switchgrass): 120677426
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Entry
120677426 CDS
T07260
Name
(RefSeq) tryptophan decarboxylase 1-like
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00350
Tyrosine metabolism
pvir00360
Phenylalanine metabolism
pvir00380
Tryptophan metabolism
pvir00950
Isoquinoline alkaloid biosynthesis
pvir00965
Betalain biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00936
Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
120677426
00360 Phenylalanine metabolism
120677426
00380 Tryptophan metabolism
120677426
09110 Biosynthesis of other secondary metabolites
00901 Indole alkaloid biosynthesis
120677426
00950 Isoquinoline alkaloid biosynthesis
120677426
00965 Betalain biosynthesis
120677426
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120677426
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
120677426
4.1.1.105 L-tryptophan decarboxylase
120677426
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120677426
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
SepSecS
Motif
Other DBs
NCBI-GeneID:
120677426
NCBI-ProteinID:
XP_039814517
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Position
6N:complement(4515417..4517244)
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AA seq
518 aa
AA seq
DB search
MGSIDANPAAFEAFAVDGFQPLNADDVRSYLHKSVDFIYDYYKSVESLPVLPAVEPGYLR
RQLQPAPPTSSAPFDVVMKEVREAVVPGMTHWASPNFFAFFPSTNSAAAIAGELIASAMN
TVGFTWQANPAATEMEVLALDWLAQLLRLPASFMNRSTGGAARGTGGGVILGTTSEAMLV
TLVSARDAALRRVGSDGVAGITRLTVYAADQTHSTFFKACRLAGFDPANIKSIPTGADTD
YALDPTKLLEIMQADVDAGLVPTYICATVGTTSSNAVDPVGAIADVAARFSAWVHIDAAY
AGSACICPEFRHHLAGVERVDSISMSPHKWLMTCLDCTCLWVRDTHRLTGSLETNPEYLK
NDASESGTVTDLKDMQVGVGRRFRGLKLWMVMRTYGAAKLQEHIRSDVAMAKMFEDAVRA
DDRFEVVVPRNFALVCFRIKPQGAMTEEDADAANRELMERLNRTGKAYLAHTAIGGKFVL
RFAVGSSLQEERHVRSAWELIKKTTAEIINKGEVDSRY
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcattgacgccaaccccgccgccttcgaggcgttcgccgtcgacggcttccag
ccgctcaacgccgacgacgtccgctcctacctccacaagtccgtcgacttcatctacgac
tactacaagtccgtggagtccctgcccgtgctcccggccgtcgagccggggtacctgcgc
cgccagctgcagcccgcgccgcccacctcatcggcgcccttcgacgtcgtcatgaaggag
gtccgcgaggccgtggtcccggggatgacgcactgggccagccccaacttcttcgccttc
ttcccctccaccaacagcgcagccgccatcgccggggagctcatcgcctccgccatgaac
accgtcggcttcacctggcaggccaaccccgccgccaccgagatggaggtgctcgcgctc
gactggctcgcgcagctcctgcgcctgccggcgagcttcatgaaccgcagcaccggcggc
gccgcccgcggcaccgggggcggcgtcatcctcggcaccaccagcgaggccatgctcgtc
acgctcgtctcggcgcgcgacgccgccctgcgccgcgtcggctccgacggcgtcgccggg
atcaccaggctcaccgtgtacgccgccgaccagacgcactccaccttcttcaaggcctgc
cgcctcgccggcttcgacccggccaacatcaagtccatcccgaccggggcagacaccgac
tacgccctcgatccgacgaagctgctcgagatcatgcaggccgacgtcgacgccggcctc
gtgccgacctacatctgcgccacggtcggcactacctcctccaacgccgtcgacccagtg
ggcgccattgccgacgtcgccgcccggttcagtgcgtgggtgcacatcgacgccgcctac
gccggcagcgcgtgcatctgtccggagttccggcaccacctcgccggcgtcgagcgcgtc
gactccatcagcatgagccctcacaagtggctcatgacgtgcctcgactgcacctgcctc
tgggtgcgcgacacgcaccggctcaccggctcgctggagacgaacccggagtacctcaag
aacgacgccagcgagtccggcaccgtcaccgacctcaaggacatgcaggtcggcgtcggc
cgccgcttccggggcctcaagctctggatggtcatgcgcacctacggcgccgccaagctc
caggagcacatccggagcgacgtcgccatggccaagatgttcgaggacgccgtgcgcgcc
gacgaccggttcgaggtcgtggtgccgaggaacttcgcgcttgtctgcttcaggatcaag
ccccagggcgccatgacggaggaggacgccgacgcggccaaccgcgagctcatggagcgc
cttaacaggaccgggaaggcgtacctggcgcacacggcgatcggcggcaagtttgtgctg
cggttcgcggtggggtcgtcgctgcaggaggagaggcacgtccggagcgcgtgggagctc
atcaagaagacgaccgccgagatcatcaacaagggagaggtcgatagtcgatactga
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