Panicum virgatum (switchgrass): 120682210
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Entry
120682210 CDS
T07260
Name
(RefSeq) actin-related protein 2/3 complex subunit 2B-like
KO
K05758
actin related protein 2/3 complex, subunit 2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
pvir04517
IgSF CAM signaling
pvir05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120682210
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120682210
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120682210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120682210
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120682210
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Arp2/3 complex
120682210
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
120682210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P34-Arc
DUF695
Motif
Other DBs
NCBI-GeneID:
120682210
NCBI-ProteinID:
XP_039819945
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All DBs
Position
7N:complement(36691078..36694568)
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AA seq
388 aa
AA seq
DB search
MLSTDGTSTMAFFSSGSQALVEILTRMQSAERPMPVDHTFFEFGSIRYHVEASASDPENV
YLSISTPSLSHEASPSSSGLPEATLQETRKAYHKFAEVVEPPREGYVLTLKLNFSALARP
KDRVKAINQVSLLQSVVLSSQLRDMLGSLGPSGTMKLVYSQSEPFFVSKTAERIHAIFPM
RFRDDTDLAIATSFFQELQDLGNSFARAPKCSWSPIPPPELRGEHVHRLTTNGGFVSFGV
VSRHVRGKKRAAKTAWILLNFQAYVKYHIKCTRSHIQSRMRQRLEALTEVIQDASLRGNH
DKTRSQAVVKKRSKRRLISFTKANAKLQKGFRAILDKIKRLRLRIRVKGLDRLRRQCQCF
AVPKLPVPPRRKEQRYHKLASVKSREQG
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgctaagcactgacggtaccagcaccatggcgttcttcagcagcggatcacaggcgctg
gttgaaatcctgacgagaatgcagagtgctgaaagaccaatgcctgttgatcacaccttc
ttcgagtttggatcgatccgataccatgtggaggcttcagcgtcggatcccgagaacgtg
tacctgtcgatatcgacgccatctctttcccacgaggcttcaccctcctccagcggcttg
cccgaagccactctgcaggagacgaggaaggcgtaccacaagttcgcggaggtcgtcgag
ccgccccgagaagggtacgtcctgacgctgaaactgaacttctccgccctcgcccgaccc
aaagatcgcgtgaaggccatcaaccaggtgtcgctgctgcaatccgtggtgctgagctcg
cagctcagggacatgctggggagcctcggcccgtccggcacgatgaagctcgtgtacagc
caaagtgagcccttcttcgtcagcaagacggccgagaggatacacgccatcttcccgatg
cgtttcagggacgacaccgacctggccatcgcgacctccttcttccaggagctgcaggac
ctcgggaactcgttcgccagggcgcccaagtgcagctggtcgccgatcccgccgccggag
ctgcgcggcgagcacgtgcaccgcctcaccaccaacggcggcttcgtgtccttcggcgtt
gtgtcgcggcacgtgagggggaagaagcgggccgccaagacggcatggatcctgctcaac
ttccaggcctacgtcaagtaccacatcaagtgcacccggagccacatccagagccggatg
cggcagcggctggaggccctgacggaggtgatccaggacgcgagcctacgagggaaccac
gacaagaccagatcacaggcggtggtgaagaagaggagcaagagacggctgatcagcttc
accaaggccaacgcgaagctgcagaagggtttcagggccattctggacaagatcaagcgg
ctgcggctcaggatcagggtgaagggtctggaccggctccggcggcagtgccagtgcttc
gccgtgcccaagctccccgtgccgccacgcaggaaggagcagagataccacaagctagca
tcagtgaaatctagggagcaaggctaa
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