Panicum virgatum (switchgrass): 120682261
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Entry
120682261 CDS
T07260
Name
(RefSeq) endoglucanase 12-like
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120682261
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
120682261
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Motif
Pfam:
Glyco_hydro_9
Motif
Other DBs
NCBI-GeneID:
120682261
NCBI-ProteinID:
XP_039820020
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Position
7N:complement(35523929..35528171)
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AA seq
624 aa
AA seq
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MYAANHWGGSFEIADGAAEDDHSRNMDLDRGALSRQQHHELDETQQSWLLGPPEAKKKDK
YVDLGCVVVKRKLLWWAFWCVVGAFVLIGLPIIIAKSIPHKKHGPPPPDQYTEALHKALR
FFNAQKSGRLPKNNGVPWRGNSGLSDGSDAKDVKGGLVGGYYDAGDNIKFHFPMAFSMTM
LSWSVIEYSAKYKAVGEYDHVRELIKWGTDYLLLTFNSSASTIDKIYAQVGAAKINGSQP
DDHYCWNRPEDMSYRRPTIAVSSAPDLGGEIAAALAAASIVFRDNAAYSKKLTHGAATVY
KFARQAGHRTPYSLRQPDIEYYYNSTSYWDEFMWSAAWMYYATGNTSYISFATDPRLPKN
AKAFLNILDFSVFSWDNKLPGAQLLLSRLRMFLNPGYPYEESLIGYHNATSLNMCMYFPR
FAAFNFTKGGMALFNHGKGQPLQYVVANSFLASLYADYMEAANVPGWYCGPNFMSTNDLR
AFAKSQLNYILGDNPRKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRDSKKA
DPNLLTGAMVGGPDRNDRFKDSRNTYGQNEPTLVGNAGLVAALVAITDSGRGVGVTAVDK
NTMFSAVPPMFPTAPPPPPSSWKP
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcggcgaaccactggggcgggtcgttcgagatcgccgacggggcggcggaggac
gaccacagccgcaacatggacctggaccgcggcgcgctgtcgcggcagcagcaccacgag
ctggacgagacgcagcagagctggttgctcggcccgccggaggccaagaagaaggacaag
tacgtcgacctcggctgcgtcgtcgtcaagcgcaagctcctgtggtgggccttctggtgc
gtcgtcggcgccttcgtcctcatcggcctccccatcatcatcgccaagtccatcccccac
aagaagcacggcccgccgccgcccgaccagtacaccgaggcgctccacaaggcgctccgc
ttcttcaacgcccagaaatccggccggcttccgaagaacaacggcgtcccgtggcgcggg
aactccggcctgtcggacggctccgacgccaaggatgtcaagggcggcctcgtcggcggc
tactacgacgccggcgacaacatcaagttccacttcccgatggccttctccatgacgatg
ctcagctggtcggtgatcgagtacagcgccaagtacaaggccgtgggcgagtatgaccat
gtcagggagctcatcaagtggggcactgactacctgctcctcaccttcaactcctctgct
tccaccatcgacaagatctacgctcaggtgggagctgcaaagatcaacggcagtcagccg
gacgaccactactgctggaaccggccggaggacatgtcgtaccgccgccccaccatcgcc
gtgagctccgcccccgacctcggcggcgagatcgccgccgccctggccgccgcctccatc
gtgttccgcgacaacgccgcctactccaagaagctgacccatggcgcggccaccgtgtac
aagttcgcgcggcaggcggggcaccgcaccccctactccctccggcagccggacatcgag
tactactacaactcgacgagctactgggacgagttcatgtggagcgccgcctggatgtac
tacgcgacgggcaacacgagctacatcagcttcgccaccgacccgcggctgcccaagaac
gccaaggccttcctcaacatcctcgacttctcggtgttcagctgggacaacaagctcccg
ggcgcccagctgctgctgtcgcggctgcgcatgttcctcaaccccggctacccctacgag
gagtcgctcatcggctaccacaacgccaccagcctcaacatgtgcatgtacttcccgcgg
ttcgccgccttcaacttcaccaagggaggcatggcgctcttcaaccacggcaaggggcag
ccgctgcagtacgtcgtcgccaactccttcctcgcctcgctctacgccgactacatggag
gccgccaacgtccccggctggtactgcggccccaacttcatgtccaccaacgacctccgc
gccttcgcgaagtcccagctcaactacattctcggcgacaacccgaggaagatgagctac
gtggtggggttcggcaagaagtacccgcggcacctgcaccaccggggcgcgtcgacgccg
cacaacggcgtcaagtactcgtgcaccggcgggtacaagtggcgcgacagcaagaaggcg
gacccgaacctgctcacgggcgccatggtcggcgggcccgaccggaacgacaggttcaag
gactcgcgcaacacctacggccagaacgagccgacgctcgtgggcaacgccggcctcgtg
gcggcgctggtggccatcaccgacagcggcaggggggtcggcgtcaccgccgtcgacaag
aacaccatgttctccgccgtgccgcccatgttccccaccgcgccgccgccgccgccgtcc
tcgtggaagccgtga
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