Panicum virgatum (switchgrass): 120682325
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Entry
120682325 CDS
T07260
Name
(RefSeq) endoglucanase 13-like
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120682325
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
120682325
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GFIT
Motif
Pfam:
Glyco_hydro_9
CBM49
Motif
Other DBs
NCBI-GeneID:
120682325
NCBI-ProteinID:
XP_039820103
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Position
7N:complement(49622803..49625527)
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AA seq
619 aa
AA seq
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MARLMTTGTSAALLMGAAFLLLAAADASPYDYAGAFDKCLQFFEAQRSGKLPADHRVKWR
GDSALTDGFSQGVDLVGGYYDSGDHVKFGFPMAYAVTMLSWGVLEFDKEMVAGAANNLQR
ALDAIRWGTNYFIKAHTEPNGLWVQVGDGDSDHLCWERAEDMSTPRTAFQIDINHPGSDV
AGETAAALAAAAKAFRPYDSMYADLLLLHAKQLFTFADTFRGRYDDSLQGAKKFYPSESG
YQDELLWAAAWLYEATGDEGYLRYVSQNAEAFGGTGWSVLEFSWDNKYAGLQVLLSKVLL
EGGAGAGADTLRQFQAKAEFFLCACLQKNNGHNIKLTPGGLLYVDDWNNMQYVSSSTFLL
TVYADYLAVSRGALKCPDGEVKPAEMIRFAKAQVDYVLGKNPKGMSYMVGYGSYFPTHVH
HRGASIPSVSDVTSAVGCMDGFDKYYNSKGADPNVLHGAIVGGPDANDGFVDERCNYQHA
EPTIAGNAPICGVFARLASEPADAASGKQTPCDCSLCGCPAGSPLELVHTVSNSWTTNGV
EYYRHVVTAKNTCGQPITYLKLHIKELSGPIYGVSAAKEKDTYELPPWLTRLGAGEQFTI
VYIQGGPAAKISVVNYKTV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggttgatgaccaccggaacgtcggccgccttgctgatgggagccgcgttcctc
ctcctggcggcggcggacgcgtcgccgtacgactacgccggcgcgttcgacaagtgcctg
cagttcttcgaggcgcagcggtcggggaagctccccgccgaccaccgcgtcaagtggcgc
ggcgactccgccctcaccgacggcttctcccagggggtggatttggtgggcgggtactac
gactcgggcgaccacgtcaagttcgggttccccatggcgtacgcggtgacgatgctgtcc
tggggcgtgctcgagttcgacaaggagatggtcgccggcgccgccaacaacctccagcgc
gcgctcgacgccatccgctggggcaccaactacttcatcaaggcccacaccgagcccaac
ggcctatgggtccaggtgggcgacggggacagcgaccacctgtgctgggagcgcgccgag
gacatgtcgacgcccaggacggcgttccagatcgacatcaaccacccgggatccgacgtc
gccggcgagacggcggccgcgctggcagcggcggcaaaggccttccggccgtacgactcc
atgtacgcggacctgctgctgctgcacgccaagcagctcttcacattcgccgacacgttc
agaggcagatacgatgactccctgcagggcgccaagaagttctatccatctgaatctggc
taccaggacgagctgctctgggcggcggcgtggctgtacgaggccaccggcgacgagggc
tacctgcggtacgtgtcccagaacgccgaggccttcggcgggacgggctggtccgtgctc
gagttctcctgggacaacaagtacgccggcctccaggtgctcctctccaaggtgctcctc
gagggcggcgccggcgccggcgccgacacgctgaggcagttccaggccaaggccgagttc
ttcctctgcgcctgcctgcagaagaacaacggccacaacatcaagctcacccccggcggg
ctcctgtacgtggacgactggaacaacatgcagtacgtgagctcctccaccttcctcctc
accgtctacgccgactacctcgccgtgtcgcgcggcgcgctcaagtgccccgacggcgag
gtcaagcccgccgagatgatcaggttcgccaaggcccaggtggactacgtcctgggcaag
aaccccaagggcatgagctacatggtcggctacggcagctacttcccgacgcacgtgcac
caccgcggcgcgtccatcccttccgtctccgacgtgacgtcggccgtcgggtgcatggac
ggcttcgacaagtactacaacagcaagggcgccgaccccaacgtgctccacggcgccatc
gtcggcgggcccgacgccaacgacggcttcgtcgacgagcgctgcaactaccagcacgcc
gagcccaccatcgccgggaacgcgcccatctgcggcgtcttcgcccgcctcgcctccgaa
ccggccgacgccgcctccggtaaacaaacaccatgtgattgttctctctgtggctgccca
gcaggctctccgctggagttggtgcacacggtgagcaactcgtggacgacgaacggcgtg
gagtactaccggcacgtcgtcacggccaagaacacgtgcggccagcccatcacgtacctg
aagctgcacatcaaggagctgtccgggcccatctacggcgtgtccgccgccaaggagaag
gacacgtacgagctccccccgtggctcacccgcctcggcgccggcgagcagttcaccatc
gtgtacatccagggcggccccgcggccaagatctccgtggtcaactacaagaccgtttga
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