Panicum virgatum (switchgrass): 120685602
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Entry
120685602 CDS
T07260
Name
(RefSeq) synaptotagmin-1-like
KO
K28063
extended synaptotagmin
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120685602
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
120685602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
SMP_LBD
SMP_MUG190-like
Motif
Other DBs
NCBI-GeneID:
120685602
NCBI-ProteinID:
XP_039823555
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All DBs
Position
2K:complement(53891432..53898369)
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AA seq
539 aa
AA seq
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MGVISTVLGFSGFGFGFSAGIVIGYFLFIYVQPNDVKDVKVRPLVEYDSKSLESILPEIP
LWVKNPDYDRIDWLNRFLELMWPYLNKAICKTAQEIAKPIIAENTAKYKIDSVEFETLTL
GSLPPTFQGMKVYVTEEQELIMEPCLKWAANPNVTVAVKAYGLKATIQIVDLQVFALPRI
TLKPLVPTFPCFAKILVSLMEKPHVDFGLKLLGADVMAIPGLYRFVQETIKKQVASMYLW
PKTLEVPIMDPSKASKKPVGILLVKVVRAQNLRKKDLLGKSDPYVKLKMSDDKLPSKKTT
VKRSNLNPEWNEDFKFVVTDPETQALEVNVFDWEQVGKHEKMGMNSVLLKDLPADETKVT
TLDLLKTMDPNDVQNEKSRGQLTLELTYKPFKEEDMEKEGTEGADVVEKAPDGTPAGGGL
LHVIVHEAQDLEGKHHTNPYAKIIFKGEEKKTKVIKKNRDPRWEDEFEFVCEEPPVNDKL
HVEVLSKAPKKGLIHGKETLGYIDISLADVISNKRINEKYHLIDSKNGQIQIEMQWRTS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtaattagcacagtgcttggtttctctggatttggctttgggttttcagctggt
attgttattgggtacttcctcttcatctacgtccagccaaatgatgtcaaggatgtcaaa
gttcgtccgcttgtggaatatgattcaaaatctttggaatccatccttcccgaaattcct
ttgtgggtcaagaatcctgactatgatagaattgattggctgaacaggtttttggagttg
atgtggccctatcttaacaaggctatctgcaaaactgcacaggaaatcgctaagccaatt
attgccgagaatactgcaaaatataagatagactcggttgagttcgaaactcttactttg
ggtagcttaccgccaacctttcaagggatgaaagtatacgtcacagaggagcaagagctg
ataatggaaccatgtcttaaatgggctgcaaatccaaatgtcactgttgctgtaaaagct
tatggtttgaaagcaactatccagattgtggatctacaagtctttgctttacctcgtatt
actctgaagccattggtgcctacatttccttgctttgctaaaatccttgtctctctcatg
gagaagccacatgttgactttgggctaaaacttcttggagcagatgtaatggctattcct
ggtctttacagatttgttcaggagaccatcaagaagcaagtagcgagcatgtatttgtgg
ccgaagacattagaagtacctataatggatccctcaaaagcatcgaaaaaacctgttgga
attctacttgtgaaggttgtaagagcccagaatctgcggaagaaggatctgctgggtaaa
tcagacccatatgtgaaacttaagatgtcagatgacaagcttccatccaaaaaaacaact
gtaaagcgcagcaatcttaatccggagtggaatgaagatttcaaatttgttgtgacagat
ccagaaactcaggctcttgaagttaatgtctttgactgggaacaggttggaaaacatgaa
aagatgggaatgaatagtgtcctattaaaagacctcccagcagatgagactaaagttact
accctcgacttgcttaagaccatggatccaaatgatgtacaaaatgagaagtctcgtggc
cagcttactctagagcttacatacaagcctttcaaggaagaagatatggagaaagaaggc
acagagggtgccgatgtggtagagaaagctccagatggtactccagctggtggtggtctg
cttcatgttattgttcatgaagctcaagatcttgaggggaagcaccatacaaacccatat
gcgaaaataattttcaaaggcgaggagaagaaaacaaaggtcatcaagaagaatagggat
ccacgatgggaggatgaattcgagtttgtgtgtgaggaaccacctgtaaatgataagcta
catgttgaagtcctaagtaaagccccgaagaaagggctgatacatggcaaggaaactttg
ggctacattgatatcagccttgcagacgtgatcagcaacaagcggattaatgagaagtac
catctcatagactcaaaaaatggccagatacagattgagatgcaatggagaacttcctag
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