Panicum virgatum (switchgrass): 120687775
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Entry
120687775 CDS
T07260
Name
(RefSeq) UDP-glucuronic acid decarboxylase 1-like
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
pvir01250
Biosynthesis of nucleotide sugars
Module
pvir_M00997
UDP-Xyl/L-Ara biosynthesis, UDP-Glc => UDP-Xyl => UDP-L-Ala
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120687775
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
120687775
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
adh_short
Motif
Other DBs
NCBI-GeneID:
120687775
NCBI-ProteinID:
XP_039825730
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Position
9N:69073333..69076324
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AA seq
415 aa
AA seq
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MKQLHRQSSMSKQHRPHHHRTSLSRTLASFLLREQRLLFVLLGFLLASSFFLLYPSLTPH
PAGGSSAATNFAAAVARKIPRGGTSSVSAASGTRRLPVGVRKPSLRVVVTGGAGFVGSHL
VDKLLARGDSVIVVDNFFTGRKDNVAHHLGNPRFELIRHDVVEPILLEVDQIYHVACPAS
PVHYKFNPIKTIKTNVMGTLNMLGLAKRVGAQFLLTSTSEVYGDPLEHPQKESYWGHVNP
IGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRK
QPMTVYGDGKQTRSFQYVSDLVDGLVTLMESNHIGPFNLGNPGEFTMLELAQVVKETIDP
GASVEFKPNTADDPHMRKPDISKAKSLLNWEPKISLKQGLPRMVSDFQKRIMEEK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagctccaccggcagtccagcatgagcaagcagcaccgcccgcaccaccaccgc
acctcactctcccgcaccctcgcctccttcctcctccgcgagcagcgcctcctctttgtc
ctcctcggcttcctcctcgcttcctccttcttcctcctctacccctccctcaccccgcat
cccgccggcggctcctccgccgctaccaatttcgctgccgccgtcgccagaaaaatcccc
cgcggcggcacctcatccgtctccgccgcctccggcacgcgccgcctccccgttggcgtc
cggaagccttccctgcgcgtcgtcgtcaccggtggcgctgggtttgtcggcagccacctc
gtcgacaagctcctcgcccgcggggacagtgtcatcgttgtcgacaacttcttcacgggc
cgcaaggacaacgtcgcgcaccacctcggcaacccgcgattcgagctcatccgccacgac
gtcgttgagccaatcctcctcgaggtcgaccagatctaccacgtcgcctgccccgcatcc
ccagtgcactacaaattcaaccccatcaagaccatcaagacaaatgtcatggggaccttg
aacatgcttggactagctaagagggttggggcccagttcttgctgactagtaccagcgag
gtgtatggtgatcctcttgaacatccacagaaggagagttactggggccatgtaaatccc
ataggtgttaggagctgttacgatgaggggaagagaacagcagaaactcttacaatggat
tatcatcgtggtgctggtgttgaggtgagaattgcacgcatattcaacacatacggccct
cgtatgtgtttagacgatggtcgagttgttagcaactttgttgcacaggctttgcggaaa
caaccaatgacggtatatggtgatgggaaacagactcgaagctttcaatatgtttcagat
ttggttgatgggttggtaactctgatggaaagtaaccatattggaccttttaacttggga
aatcctggagaatttacaatgttggagcttgcgcaggtggtaaaagaaacaatcgaccct
ggtgcatctgtcgagttcaaacccaacactgcagatgatccacacatgagaaaacctgac
atctctaaggccaaatctcttctgaattgggagcccaaaatctcactgaaacaaggcctg
ccgcgtatggtctcggacttccagaaacgtataatggaagagaaatga
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