Panicum virgatum (switchgrass): 120691205
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Entry
120691205 CDS
T07260
Name
(RefSeq) endoglucanase 9-like
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120691205
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
120691205
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
Motif
Other DBs
NCBI-GeneID:
120691205
NCBI-ProteinID:
XP_039830158
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Position
9N:65428232..65432123
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AA seq
619 aa
AA seq
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MSMYGRDPWGGPLEICHDSATDDDRSRNLDIDRGALSRTLDETQQSWLLAGPGDQGRRRK
KYLDIGCLVVSRKFFVWTLGVLLAAAVFAGVVAGIAKAIPRRHRPPPPPDDYTVALHKAL
MFFNAQRSGKLPKHNNVPWRGNSCMKDGLSDPAVRRSLVGGYYDAGDAVKLNFPAAFSMT
LLSWSVIEYSAKYEAVGELDHVRDIIKWGADYFLKTFNSTADSIDRVVVQVGSAATSPGS
TQPNDHYCWMRPEDIDYPRPVVECHACSDLAAEMAAALAAASIVFKDNKAYSQKLVHGAA
TLFQFARDRRGRYSAGSSDAAKLYNSTGYWDEFVWGSSWMYLATGNSSYLTLATNPKLAK
HAGAFWGGPDYGVFSWDNKLAGAQVLLSRLRLFLSPGYPYEEMLRTFHNQTSIIMCSYLP
IFKSFNRTKGGLIQLNHGKPRSLQYVVNAAFLASVFSDYLEAADTPGWYCGPHFYSIEVL
RSFARTQIEYILGKNPLKMSYVVGFGKHYPKHVHHRGASIPKNGVHYGCKGGWKWRDTKK
PNPNIIVGAMVAGPDRHDGFKDARKNSNYTEATLAGNAGLVAALVALSGEGHGVDKNTMF
SAVPPMFPSPPPPPAPWKP
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgtacgggagggacccgtggggcgggccgctggagatatgccacgactcggcc
acggacgacgaccgcagccggaacctggacatcgaccgcggcgcgctgtcgcggacgctc
gacgagacgcagcagagctggctgctggcggggcccggggaccagggccgcaggaggaag
aagtacctcgacatcggctgcctcgtcgtcagccgcaagttcttcgtctggacgctcggg
gtgctcctcgccgccgccgtcttcgcgggggtcgtggccgggatcgccaaggccataccc
aggcgccaccgcccgccgccgccgcccgacgactacaccgtcgcgctgcacaaggcgctc
atgttcttcaacgcccagagatctggcaagcttccgaagcacaacaatgtaccatggcgt
ggcaactcttgcatgaaggacggactctctgacccggcagtccggcgaagcctagtcggc
gggtactatgacgctggtgacgccgtcaagctcaacttcccagctgcattctccatgacc
ctcctcagctggagtgtcattgagtacagtgctaagtacgaggctgttggggaacttgac
catgtccgtgacattatcaagtggggagcagactacttcttgaagacatttaactccaca
gcggatagcattgatcgtgtcgttgtgcaggtgggaagtgctgcaacgtcgcctggttct
acacagcccaatgatcactattgttggatgaggccagaggacattgactacccacgtcca
gtggttgagtgccacgcttgttcggatcttgctgctgaaatggctgcagcattagctgca
gcttctattgttttcaaggacaataaggcttactcacagaaacttgtacatggtgctgcc
actctcttccaatttgcaagggatcggcgtgggaggtatagtgcaggcagttcagatgct
gcaaagttatacaattcaaccggttactgggatgagtttgtgtggggtagttcatggatg
taccttgcgactggcaattcgtcatacttgactctagccacaaatcccaagcttgcgaag
catgctggtgctttctggggtggtccggattatggtgtgttcagttgggataataaactc
gcaggtgcacaggttcttctaagccggttgaggcttttcttgagtcctggatatccgtat
gaagagatgctgaggacattccacaaccaaactagcattatcatgtgttcctatcttccc
atcttcaagtctttcaacagaacaaaaggtggtttgattcagttaaatcacgggaagcca
cgatcccttcaatatgtggtcaacgctgcattccttgcttctgtgttcagtgactatctt
gaggctgcggatacccctggatggtattgcggcccccatttctactctattgaggttctt
cgcagctttgcaaggacgcagattgagtacatcctgggaaagaatcctttgaagatgagc
tatgtggttgggtttggaaagcattaccccaagcatgttcaccaccgcggtgcgtcgatc
cccaagaacggtgttcactatggctgcaaaggagggtggaagtggagggacaccaagaag
ccaaaccctaacatcatagttggagccatggttgctggcccggatcgccatgatggattc
aaagatgcccgcaagaactccaactacactgaagcaacgctggcgggcaatgctggtcta
gtcgcagcattggtagctctgtcaggtgaaggccatggggtggacaagaacacgatgttc
tctgccgtgccacccatgttcccttcgcctccaccaccaccggcgccatggaaaccatag
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