Panicum virgatum (switchgrass): 120691547
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Entry
120691547 CDS
T07260
Name
(RefSeq) dnaJ homolog subfamily C member 8-like isoform X1
KO
K09528
DnaJ homolog subfamily C member 8
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120691547
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120691547
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120691547
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP40 / DNAJ
120691547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaJ
Motif
Other DBs
NCBI-GeneID:
120691547
NCBI-ProteinID:
XP_039830574
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All DBs
Position
9N:complement(70550551..70554713)
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AA seq
249 aa
AA seq
DB search
MGSSEADEDQLLKSFLAEVSEAERENEVLSDVRILGCFKLNPFEHLKLSFDSSPDEVKKQ
YRKLSLLVHPDKCKHPQAQEAFAALAKAQQLLLDPQERGYILDQVTAAKEELRAKRKKEL
KKDSASKIKSLVDEGKYEEQFERSDEFQQQLIIKVREILTEKEWRRRKMQMRISEEEGRL
KKDEEETKEMWKRKREHEEKWEETRDQRVSSWRDFMKTGKKGRKGEIKPPKLKTEDPNKS
YVQRPVKRN
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgtcggaggccgacgaggatcagctcctcaagagcttcctggcggaggtcagc
gaagccgagcgcgaaaatgaagtgctcagtgatgtaaggatacttggttgcttcaagtta
aacccctttgagcatcttaagttgtcttttgattcatctccagatgaggtgaagaagcaa
tataggaagttgtcattgttggtccatcctgataaatgcaagcatccgcaggcacaagaa
gcttttgcagctctggcaaaagcacagcaactcctgcttgatccacaggaaagaggatac
attctcgaccaagttactgctgcaaaagaagagttgagggcaaagagaaaaaaggaactg
aagaaggacagtgcatccaagataaaatcccttgtagacgagggaaaatatgaagagcag
tttgaacgatcggatgaatttcagcagcagctaataattaaagtgcgtgaaattttgacg
gagaaagagtggcgtaggagaaaaatgcaaatgaggatatcagaggaagaaggaagactt
aagaaggatgaggaggaaacaaaagagatgtggaagaggaagagagagcatgaagagaag
tgggaggagacgagagatcagcgggtctctagctggagggatttcatgaagacaggaaag
aagggacggaaaggtgaaatcaaacccccaaaacttaagactgaagatccaaacaagtct
tatgtgcagaggccagtgaagcgcaattaa
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