Panicum virgatum (switchgrass): 120692420
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Entry
120692420 CDS
T07260
Name
(RefSeq) ABC transporter G family member 22-like isoform X1
KO
K05681
ATP-binding cassette, subfamily G (WHITE), member 2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120692420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120692420
04147 Exosome [BR:
pvir04147
]
120692420
04090 CD molecules [BR:
pvir04090
]
120692420
Transporters [BR:
pvir02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
120692420
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of breast milk
120692420
CD molecules [BR:
pvir04090
]
Proteins
120692420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
ABC2_membrane_3
AAA_21
AAA_16
AAA_25
AAA_29
AAA_22
RsgA_GTPase
AAA_18
Motif
Other DBs
NCBI-GeneID:
120692420
NCBI-ProteinID:
XP_039831638
LinkDB
All DBs
Position
9N:78582781..78589060
Genome browser
AA seq
763 aa
AA seq
DB search
MESIMEKPVAVDAAAGGGGGGGAGRTRSDQLAPSQSLSRTASAETVLSNADTTSLSRKSS
FGRKRTASAGGGGGGGGGNRHIRKSRSAQLKVDVEDLVSSSAALSRASSASLGFSFTFTG
FTPPPQGMHYSADPTTFSDDDSPMDIEAGARRRKKLMTEPTLPIYLKFTEVKYRLSAKKG
SPREILGGISGSVSPGEVLALMGPSGSGKTTLLSILGGRAGGGAVEGCVSYNDEPYSKSL
KRRIGFVTQDDVLFTHLTVKETLTYAALLRLPRTMTRQQKKERAMDIIYELGLERCQDTM
IGGSFVRGVSGGERKRVCIGNEILINPSLLFLDEPTSGLDSTTALRIVQLLHDIAEDGKT
VITTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMPYFQSIGCTPLIAMNPAEFLLDL
ANGNTNDVSVPSELDDKVHMENHTLENNNSKNDYRPSAQDVHEYLVDAYETRVAFKEKKK
LLAPLPISDDLKATITSSKREWGTSWCQQYSILFCRGIKERRHDYLSWMRITQVIATSII
LGLLWWHSDPSTLKGLEDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAVDMYKL
SAYFLARMTSDLPLDLFLPVVFMVIVYFMAGLKATATHFFLSILTVFLSIIAAQGLGLAI
GATLLDIKKATTLASVTVMTFMLAGGFFVKRVPPFISWLRYLSFNYHTYRLLLKVQYDPV
PDILTTTKHIDNGATEVAALVAMIIGYRVLAYLSLRRVKVPSS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgataatggagaagccggtggcggtggacgccgcggccggcggcggcggagga
gggggtgccggtcggaccaggtcggaccagctggcgccgtcgcagtcgctgagccggacg
gcgtcggcggagacggtgctgagcaacgcggacacgacgagcctgtcccgcaagtccagc
ttcgggcggaagcgcacggcgtcggccggcggcggcggcggcggcggcggcggcaacaga
cacatccgcaagtcgcggagcgcgcagctgaaggtggacgtggaggacctcgtcagcagc
agcgccgcgctcagccgcgcctccagcgccagcctcggcttctccttcaccttcaccggc
ttcaccccgccgccgcagggcatgcactactccgccgacccgacgaccttcagcgacgat
gacagccccatggacatcgaggccggcgcgcggcggcgcaagaagctgatgacggagccg
accttgccgatatacctcaagttcacggaggtgaagtacaggttgtcggcgaagaagggc
tcgccgcgggagatcctgggcgggatatccgggtcggtgtcccccggcgaggtgctggcg
ctgatgggcccgtccggcagcggcaagacgacgctgctgagcatcctgggcggcagggcc
ggcggcggcgccgtggagggctgcgtctcctacaacgacgagccctacagcaagtccctc
aagcgcaggataggatttgtgactcaagatgatgttctctttacccatcttactgtgaaa
gagacattgacttacgcggcactacttcgtctcccaagaacaatgactaggcaacaaaag
aaagaacgggcaatggacatcatatatgagcttggccttgaaaggtgccaggacacaatg
attgggggatcttttgtgcgtggggtttcagggggtgaaaggaaaagagtttgcattgga
aatgagattctgatcaatccatctttattgtttcttgatgagccaacatctgggctggat
tcaactacagccctaaggatcgttcaacttcttcatgacatagctgaggatgggaagacg
gttatcaccacaattcaccaaccatctagcaggctgtttcataagtttgacaagcttatc
ctcctgggcaaaggaagtttgctatactttgggaaggcatctgaagccatgccctacttc
cagtccattggatgcaccccactcatcgcgatgaacccagcagagtttctactggatctc
gccaatggcaacactaacgatgtttcagtcccttcagagttagatgataaggtgcatatg
gaaaatcacactttggagaataataattccaagaatgactacaggccatcagcacaagat
gttcatgagtatttggtagatgcctatgagactcgagtggcttttaaggagaagaagaag
cttctagctccacttccgatcagtgatgacctgaaggcaactataacatcatcgaagcga
gagtggggcacaagctggtgtcagcaatattccatcctcttttgtagagggatcaaggaa
agacggcatgattatttgagctggatgagaataacccaggtcatagctacatcgattatc
ttaggtttattatggtggcactctgatcccagtacactaaaaggtctagaagatcaggct
ggcttactgtttttcattgctgtgttttggggtttctttcctgtctttactgcaatcttc
acattccctcaagagagggcaatgttgaacaaggaacgggcagttgacatgtacaagctc
agtgcatacttcttggccagaatgacaagtgatctaccacttgaccttttcctccctgtc
gtattcatggtgatcgtctacttcatggcaggcctcaaagcaactgccacacatttcttt
cttagcatcctgactgtcttcctcagcataattgctgctcagggactaggattggcaatt
ggagctaccctgctggatatcaagaaggcaacaactctagcttcagttacagtcatgacg
ttcatgctagcaggaggcttctttgtaaagagggttcccccattcatctcctggctgcgc
tacctgtccttcaactaccacacgtacaggctcctgctcaaggtgcagtacgatcccgtg
ccggacatcctgaccaccacgaaacacattgacaacggcgccaccgaggtcgctgctctc
gtcgccatgatcatcgggtaccgggtgctggcgtacctgtcgctgagaagggtgaaggtc
ccaagcagctag
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