Panicum virgatum (switchgrass): 120692734
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Entry
120692734 CDS
T07260
Name
(RefSeq) polyubiquitin 12-like
KO
K08770
ubiquitin C
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120692734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120692734
Ubiquitin system [BR:
pvir04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
120692734
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
OTU1_UBXL
UBL_UBAC1
Plexin_RBD
PH_AIR9
Motif
Other DBs
NCBI-GeneID:
120692734
NCBI-ProteinID:
XP_039832051
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All DBs
Position
9N:complement(24001159..24004479)
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AA seq
324 aa
AA seq
DB search
MKRGAMDLRQEQPPRYKIQVKMVKTVALDVKSTDTVDQIKSKISAIEGIDKSQQALFFGG
NHLENNNRLADYNIMTNSSVDLYVTDGIQISVSIPSVGKVIKLNLKKSQSVADVKSEIEQ
KVGIPLDEQILMYGCRQLEDNKQLSQCGLRNGRTLHVLVCPTDKLRISVNVDGERIVNLD
VKSWYTIADVKLMIETFEGLPARSLILMRTQPGGAETLPDTDTLQNQHIRNNDTLMLHQN
IQFFVKTYEGKSLTMSMRTCDTTDKVMEKVEAKLMMKAGVYYLHYRGHVMSPGDALQKHK
VANNSTVDIRLRNSCVVSKYAKAK
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggggcgccatggacctgcgccaggagcagccgcctcgctacaagatccaagtc
aagatggtgaaaacagtggcacttgatgtgaagtccactgataccgttgatcagatcaag
tctaagatcagtgccatagaggggattgacaagagccagcaagcgctcttttttggtgga
aatcacttggagaacaacaacaggctcgctgattacaacatcatgacaaactcttctgtc
gacctctatgtaaccgatgggatacaaatatctgtcagtatcccctcggttggaaaggta
atcaagctcaatttgaagaaatcccagagtgttgctgatgtcaagtcagagatcgaacag
aaggtgggaattcctctggatgaacaaatcctgatgtatgggtgccgacagcttgaggac
aacaagcagctcagtcagtgtggtttgaggaatggccgcacgctgcatgttctggtctgc
ccaactgacaagctgcgtatatctgtcaatgttgatggtgaaagaattgtgaatctggat
gtcaaaagctggtatactattgctgatgtcaagttgatgattgagacctttgagggttta
cctgcacgctcactgatactcatgcgaactcaacctggtggtgctgaaacattgccagac
actgatacgctgcagaatcagcacatcaggaacaatgacacactcatgctacatcagaac
atccagttcttcgtcaagacatatgaagggaagtcgttaacaatgtctatgaggacgtgt
gacacgacggacaaagtcatggagaaggttgaagcaaagctgatgatgaaggcaggcgtc
tactacctgcactacagggggcatgttatgagtcctggggatgctcttcagaagcacaag
gtcgcgaacaattccacagtcgatatccgccttcggaattcatgtgtagtatccaagtat
gccaaagcaaaatga
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