Panicum virgatum (switchgrass): 120695781
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Entry
120695781 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120695781 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120695781
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
120695781
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
Motif
Other DBs
NCBI-GeneID:
120695781
NCBI-ProteinID:
XP_039834943
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Position
2K:51377120..51379266
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AA seq
307 aa
AA seq
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MAAAAATAGDRRRRSRAPAGGAAAGNDDGEEQHLNPFLDATPSASSRVQFRWVSALLRLL
LMSSWYWLLASVTRPLNVFCGGGRRNVASRARWVEEVGAAEVVESKGKLWLTTGVTRGGK
LCYNVEEIGFLVERGALILLNDKDETVGIEAIYEKIAGGKYGCSWDSFQAYKHLKSLGYI
VGRHGVPWTMKNSGTCDTTVPPSVVHTDQSFNRIDGTCSDITKLLKEMHIDGISPSFEVY
LPNSKFKKSSPGAPSFLLYLSRNKPPSRVELEMVENNFGTVPLKYCHVDNGRVSFLSFDK
VALPSLP
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggctgcaaccgctggcgaccgccgcagaaggagccgcgctccagcgggt
ggcgccgcggccggaaacgatgatggcgaggagcagcatctcaaccccttcctggacgca
actccatccgcctcctcgagggtccagttcaggtgggtgagtgctttgctgcggttgctg
ctcatgagcagttggtattggctccttgcaagtgtgacccgcccgctcaatgtgttctgc
ggcggcgggcgcaggaacgtggcctcacgcgcgcggtgggtggaagaggtcggtgctgca
gaggtggtggagagcaagggcaagctgtggctgaccaccggcgtcacccggggtggcaag
ctgtgctacaacgtcgaggagatcgggttcttggttgaaaggggtgccttgattcttctc
aatgacaaggatgaaacggtaggaatagaagccatttatgaaaagattgctggaggaaaa
tatgggtgttcctgggattccttccaagcttataagcacttgaaatcgcttggttatatt
gttggacgacacggtgtcccctggacaatgaagaatagcggtacttgtgacactactgtt
cctcccagtgtggtgcacactgatcagagcttcaatagaatcgatggcacctgcagtgac
ataaccaaattgctgaaggaaatgcacattgatgggatatctccatcctttgaagtgtat
ttgcctaacagcaagttcaaaaagtcatccccaggagcccctagcttcctcttatatctg
tcaaggaataagcccccctcaagggttgaattggaaatggtggaaaacaattttgggact
gttcctctgaaatattgccatgtggataatgggcgggtcagttttctttccttcgacaag
gtcgcacttccaagcttgccctga
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