Panicum virgatum (switchgrass): 120697852
Help
Entry
120697852 CDS
T07260
Name
(RefSeq) 3-deoxy-manno-octulosonate cytidylyltransferase-like isoform X1
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00541
Biosynthesis of various nucleotide sugars
pvir01100
Metabolic pathways
pvir01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
120697852
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pvir01005
]
120697852
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
120697852
Lipopolysaccharide biosynthesis proteins [BR:
pvir01005
]
Lipid A
120697852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
IspD
DUF2064
NTP_transferase
Motif
Other DBs
NCBI-GeneID:
120697852
NCBI-ProteinID:
XP_039837149
LinkDB
All DBs
Position
3K:15746935..15749958
Genome browser
AA seq
297 aa
AA seq
DB search
MPICPPSSDSSASSASGGRAWIVHGLALGVAAAAAAAAAYLYRRPSGFRSRAVGIIPARF
ASSRFEGKPLAHILGKPMIQRTWERVMLASSLDHVVVATDDERIADCCRGFGADVIMTSE
SCRNGSERCCEALEKLGKRYDIVVNIQGDEPLIEPEIIDGVVMALQRAPDAVFSTAVTSL
KPEDASDTNRVKCVVDNQGYAIYFSRGLIPSNKSGKVNPNYPYLLHLGISGFDSKFLMIY
PELPPTPLQLEEDLEQLKVLENGYRMKVIKVDHDAHGVDAPEDVQKIEELMRGRNIQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgccgatctgcccgccgtcgtcggactcctcggcctcgtcggcctccggcggccgcgcg
tggatagtccacgggctggcgctcggcgtggcggccgcggcggccgccgccgcggcgtac
ctgtaccgccggccgagcgggttccgcagccgcgcggtggggatcatacccgcgcgcttc
gcctcctcgcgcttcgagggcaagccgctcgcgcacatcctcggcaagcccatgatccag
agaacatgggaaagagttatgttagcttcttccttggaccacgttgttgtggcaacagat
gatgagagaattgcagattgttgtcgaggatttggagctgatgttataatgacatcagaa
tcatgcagaaatggatctgagcgctgctgtgaggcacttgaaaagcttgggaaacgttat
gatattgttgtcaatattcaaggagatgagcctcttatcgaaccagagataatagatggt
gtcgttatggcattgcagcgagctcctgatgcagtgttcagcacagctgttacttcactg
aaacctgaagatgcatctgatacgaatcgagttaagtgtgttgtggataatcagggctat
gcaatctacttttcaagagggctgataccatccaacaaatcagggaaagtcaatcctaat
tatccgtatcttctccatcttggaatctcgggctttgattcgaagttcttgatgatctat
ccagaacttccaccgacacctttacaactagaagaggacctagagcaactcaaagttctt
gaaaacggctataggatgaaggtgatcaaagtggaccacgatgctcatggtgtagatgca
cctgaggatgttcagaaaatcgaagaactgatgcgagggagaaacattcagtag
DBGET
integrated database retrieval system
