Panicum virgatum (switchgrass): 120698164
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Entry
120698164 CDS
T07260
Name
(RefSeq) calreticulin-like isoform X1
KO
K08057
calreticulin
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
pvir04145
Phagosome
pvir04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120698164
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120698164
04148 Efferocytosis
120698164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120698164
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pvir04091
]
120698164
Chaperones and folding catalysts [BR:
pvir03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
120698164
Lectins [BR:
pvir04091
]
Calnexin / calreticulin
120698164
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
CDC45
Neural_ProG_Cyt
Motif
Other DBs
NCBI-GeneID:
120698164
NCBI-ProteinID:
XP_039837627
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Position
3K:complement(19637359..19641373)
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AA seq
425 aa
AA seq
DB search
MAIRGESSFALAALLAVASVAAVAGEVFFQEKFEGSCLCPDGWESRWVKSDWKKDENMAG
EWNHTSGKWNGDAEDKGIQTSEDYRFYAISAEYPEFSNKGKTLVLQFSVKHEQKLDCGGG
YVKLLGGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTKDGKNHLIKKDVPCETDQL
THVYTLIIRPDATYSILIDNEEKQTGSVYEHWDILPPKKIKDPEAKKPEDWDDKEYIPDP
EDKKPEGYDGIPKEIPDPDAKKPEDWDDEEDGEWTAPTIPNPEYKGPWKQKKIKNPNYQG
KWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPALAKKFAEDTW
GKHKEAEKAAFDEAEKMKEEEEAAKAGEDDDDLEDEEDDEKVDEDKADSDAEDGKDSDDE
KHDEL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcgattcgcggggagtcttcgtttgccctcgcggcactgctcgcggtcgcctctgtc
gccgccgtcgccggcgaggtcttcttccaggagaagttcgaaggatcctgtttatgccca
gatggctgggaaagtcggtgggtcaagtccgactggaagaaggatgagaacatggctggt
gaatggaaccacacctctgggaaatggaatggagatgctgaggacaaaggtatccagacc
tctgaggactacaggttctatgccatttcggcggagtaccctgagttcagcaacaagggt
aagaccctggtgctgcagttctcagtgaagcacgagcagaagctggactgtggtggtggt
tatgtaaagttgcttggtggtgatgtggaccagaagaaattcggtggcgacacaccttac
agcattatgtttggaccagatatctgtggatacagcaccaagaaggttcacgctatcctg
acaaaggatggcaagaaccacctgatcaagaaggatgtgccttgcgagactgaccagttg
acacatgtgtacactttgatcatccgccctgatgcgacatacagcattctcattgacaat
gaagagaagcaaacaggcagtgtctacgagcactgggacattcttcccccaaagaaaatc
aaggacccagaggctaagaagcctgaagattgggatgacaaggagtacattcctgacccc
gaggacaagaagccagagggctatgatggcattcccaaggaaattcctgaccctgatgct
aagaagcctgaggactgggatgatgaggaagatggtgaatggactgcccctaccattccc
aacccagaatacaagggaccatggaagcaaaagaaaatcaagaacccgaactaccagggt
aaatggaaggcacctatgattgacaacccagatttcaaggatgatccgtacatttatgct
tttgacagcctcaagtacattggcattgagctgtggcaggttaaatcaggtactttgttt
gacaacatcatcatcaccgacgaccctgcattggctaagaaatttgcagaggatacctgg
ggcaagcacaaggaggctgagaaggctgcttttgatgaggctgagaagatgaaggaagag
gaggaagctgccaaggccggtgaggacgatgatgacctagaggatgaggaagatgatgag
aaggtagatgaggacaaagctgactctgatgctgaggatggcaaggattctgatgatgag
aagcacgacgagctctag
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