KEGG   Panicum virgatum (switchgrass): 120698177
Entry
120698177         CDS       T07260                                 
Name
(RefSeq) signal recognition particle 54 kDa protein 2-like
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03060  Protein export
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    120698177
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pvir02044]
    120698177
Enzymes [BR:pvir01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     120698177
Secretion system [BR:pvir02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   120698177
  Eukaryotic Sec-SRP protein
   120698177
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin cobW Fe-ADH nSTAND3 AAA_22 AAA_19 AAA_16 AAA_17 AAA_33 ResIII ATP_bind_1 AAA_30 NPHP3_N nSTAND_NTPase5 vWA-TerF-like APS_kinase
Other DBs
NCBI-GeneID: 120698177
NCBI-ProteinID: XP_039837641
LinkDB
Position
3K:19694813..19697957
AA seq 477 aa
MVLAELGGSIARALARMKGATVVDEKVLADCLNEISRALLQADVRFETVRDVKAGIKSTV
NLDALAAGTDKRRIIHKAVVGELCRMLDPGKPAFTPSKGKPSVVMFVGLQGSGKTTTCTK
YADYYRRKGFNPALVCADTFRAGAFDQLKQNATKAKIPFYGSYVESDPVKIAVEGVDRFR
KEKCDLIIVDTSGRHKQEAALFEEMRQVSEATKPNLVIFVMDGSIGQAAFDQAQAFKQSA
SVGAVIVTKMDGHAKGGGALSAVAATRSPIIFIGTGEHIPDFEVFDVKPFVSCLLGMGDL
SGLMDKIQDVMPADELLPKLTEGAFTLRLLYEMFQNLQNMGPLGQLFSMIPGLSAQFIEK
GKEKEGQAKIKRYMTIMDSMTEKELDNKNPKLINESRINRIARGSGRLVKEVVDMLEEHK
RIAKMWSKLPLQNIKRPLTNNRDLKPLVNAVPPNMLNQLGGLNGLQNMMKQMGSHKR
NT seq 1434 nt   +upstreamnt  +downstreamnt
atggtgctcgcggagctgggcgggagcatcgcccgcgcgctggcgcggatgaagggcgcg
accgtcgtggacgagaaggtgctcgcggactgcctcaacgagatctcgcgcgcgctcctg
caggccgacgtccgcttcgagacggtgcgtgacgtcaaggccggcatcaagagcaccgtc
aacctcgacgcgctcgccgcgggcaccgacaagcgccgcatcatacacaaggccgtcgtc
ggtgagctatgcagaatgctggatccagggaagccggccttcacccccagcaaagggaag
cccagcgtggtcatgttcgtcggcttgcagggttctggaaaaaccacaacttgtacaaag
tatgcagattattatcggcgcaaagggtttaatccagcacttgtttgtgccgatacattc
cgagctggtgcttttgatcagttgaaacaaaatgcaacaaaagccaaaatacccttctac
ggaagctacgttgaatcagatcctgtgaaaattgctgttgagggtgtggatagatttagg
aaagaaaagtgtgatctcattattgtagatacaagtggacgtcacaagcaggaagctgct
ctttttgaagaaatgcgccaagtttcagaggctacgaaaccaaacctagtgatatttgtg
atggatggtagtattggtcaggctgcatttgatcaggcgcaagcatttaaacagagtgct
tctgttggtgctgttattgttacaaaaatggatgggcatgcaaaaggcgggggtgcactt
agcgcggttgcagctacaagaagcccaatcatatttattggaactggagagcatattcca
gattttgaagtcttcgatgtgaaaccattcgttagttgcctgttaggcatgggagacttg
tctggcttgatggacaagatccaagatgttatgccagctgatgaactcttgccaaagctg
actgaaggagctttcactcttagacttctgtatgagatgttccagaatctccaaaatatg
ggtcctcttgggcagctcttttctatgatacctggtcttagtgcccagtttattgaaaaa
ggaaaggaaaaggaaggtcaagcaaagattaagcggtacatgacgatcatggactccatg
actgaaaaagagcttgacaacaagaatccaaagttgataaacgagtcgcggatcaaccgt
atcgctcggggatcgggcagacttgtcaaggaagtggtggacatgctggaggagcacaag
cgaattgccaaaatgtggagcaaattgccgctccagaacatcaagagaccattaactaac
aatcgtgacttaaagccgctagttaatgcggttcctccaaatatgctgaatcagctgggt
ggcctaaatgggttgcaaaatatgatgaaacagatgggttctcataaaagatga

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