Panicum virgatum (switchgrass): 120703104
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Entry
120703104 CDS
T07260
Name
(RefSeq) shikimate kinase 2, chloroplastic-like
KO
K00891
shikimate kinase [EC:
2.7.1.71
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01230
Biosynthesis of amino acids
Module
pvir_M00022
Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
120703104
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.71 shikimate kinase
120703104
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GFIT
Motif
Pfam:
SKI
AAA_18
Cytidylate_kin2
AAA_33
CoaE
Cytidylate_kin
dNK
AAA_17
AAA_16
AAA_22
ABC_tran
APS_kinase
AAA
Ploopntkinase3
TsaE
AAA_29
Motif
Other DBs
NCBI-GeneID:
120703104
NCBI-ProteinID:
XP_039843053
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Position
4K:11371107..11372718
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AA seq
219 aa
AA seq
DB search
MFQLNGRCIYLVGMMGSGKSTVGKILAEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEA
FFRENESNVLRDLSSMQRLVVATGGGAVIRPINWNYMKKGLSVWLDVPVDALAKRIAQVG
TASRPLLDQPSDDPYTAAFTKLSMLAEQRGEAYANADARVSLEEIAAKQGHGDVSKLTPT
DIAIEALLQVGNFVNEHPTIHSQVGDLQVDSHSRRVQTL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgttccaattgaatgggcggtgcatttacctagtgggaatgatgggctctggaaagagc
acggtgggaaagatattggctgaagttctgggctattcattctttgacagtgataagttg
gtagaacaagcagttggcatgccttccgttgctcaaatatttaaggttcatagtgaagcg
tttttcagagagaatgagagtaatgtcttgagggatttgtcctcaatgcagcgattagtt
gttgcaactggaggtggtgctgttattaggccaatcaactggaattacatgaagaaaggt
ctatctgtttggttggatgtacctgtggacgcacttgcaaaacgtattgctcaagtgggg
actgcttctcgtcctctcctagaccaaccatctgacgatccatacacagcggctttcacg
aaactgagcatgcttgcggagcaaagaggtgaggcttatgcgaacgccgatgcaagagtg
tctcttgaagagatcgcagctaagcagggccacggtgatgtttctaagctgacaccgact
gatatcgccatcgaggcgctactccaggttggaaactttgtcaatgaacatcccacaatc
catagccaagtgggcgacttgcaagttgattcacatagccgtagggtccaaaccttgtag
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