Panicum virgatum (switchgrass): 120703580
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Entry
120703580 CDS
T07260
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP40-like isoform X1
KO
K05864
peptidyl-prolyl isomerase D [EC:
5.2.1.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120703580
Enzymes [BR:
pvir01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
120703580
Chaperones and folding catalysts [BR:
pvir03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
120703580
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Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
TPR_2
TPR_1
TPR_CcmH_CycH
TPR_8
TPR_11
TPR_16
TPR_14
MIT
TPR_12
TPR_6
TPR_19
Motif
Other DBs
NCBI-GeneID:
120703580
NCBI-ProteinID:
XP_039843629
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Position
4K:complement(26950534..26957229)
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AA seq
390 aa
AA seq
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MEGGGAEPAPAAAAAEVKNPRCFMDVTIGGEMEGRIVIELYASVVPRTAENFRALCTGEK
GVGAATGKPLHFKGSCFHRVIKGFMVQGGDITAGDGTGGESIYGSKFVDENFVLKHERKG
MLSMANSGPDTNGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSIEHVPVGEADCPTLD
VKIVDCGELPEGADDGVVNFFKDGDKYPDWPNDLEEKPAEVSWWMDAVESAKSYGNDNFK
KQDYKVALRKYRKALRYLDVCWEKEEIDEEKSTALRKTKSIILTNSSACKLKLGDLKGAL
LDADFALREREGNAKAFFRQGQAHIALNDIDAAVESFKHALELEPNDGGIKRELAAAKKK
IADRRNQERKAFARMFQPSGKSDKSSEENN
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggagggcggcggcgcggaaccagcgcccgcggcggcggcggccgaggtgaaaaacccg
aggtgcttcatggatgtcaccatcggcggcgagatggaggggaggatcgtaatagaactc
tacgcgtccgtggtgccgcggacggcggagaacttccgcgcgctctgcactggggagaag
ggcgtcggcgccgccaccggcaagccgcttcacttcaagggctcttgcttccatcgcgtt
attaaaggttttatggttcaaggtggagatataactgctggtgatggtacaggaggagag
tcaatctatgggtccaaatttgtggatgagaattttgttttaaaacatgagaggaaagga
atgctttcaatggctaattctggtcctgacacaaatggttctcagtttttcatcactact
acccggacacctcatttagatgggaaacatgttgtttttggtagagtgataaagggaatg
ggggtagttcgctctatcgagcatgtccctgttggagaagctgactgccctacccttgat
gtgaaaattgttgattgtggggaacttcctgaaggcgctgatgatggagttgtgaacttt
ttcaaagatggcgacaaatatccggattggcccaatgatcttgaagagaagcctgcagag
gtttcatggtggatggatgctgtggagtcagctaaatcttatgggaatgacaatttcaag
aaacaagactataaggtggctctcagaaagtacaggaaagctctgcgctacttggatgtt
tgctgggagaaagaagagattgatgaagagaagagcacagcactacggaagaccaagtca
ataatactcactaatagctctgcatgcaaattgaagttgggagatttgaagggtgctttg
ttggatgcggattttgcactgcgtgaaagggagggaaatgctaaggcttttttccgacaa
ggacaggcacacattgcacttaatgacattgatgcagcagtggagagcttcaagcacgca
ctggagttggagccaaatgatggtggaatcaaaagagagctggctgctgcaaagaagaag
attgctgacagaagaaaccaggagcggaaggcatttgctaggatgttccaaccttctgga
aaatctgataagagcagcgaagagaacaattga
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