KEGG   Panicum virgatum (switchgrass): 120704243
Entry
120704243         CDS       T07260                                 
Name
(RefSeq) polyubiquitin
  KO
K08770  ubiquitin C
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120704243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120704243
Ubiquitin system [BR:pvir04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   120704243
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 TBK1_ULD Dsc3_N DUF2604 Ubiquitin_5 UBL_UBAC1
Other DBs
NCBI-GeneID: 120704243
NCBI-ProteinID: XP_039844492
LinkDB
Position
4K:44337467..44340213
AA seq 381 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGQ
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgcagatctttgttaagaccctcaccggcaagaccatcactttggaggttgagtcgtct
gacaccattgacaatgtgaaggccaagatccaggacaaggagggcatccctccggaccag
cagcgtctgatcttcgctggcaagcagcttgaggatggccgcaccctagcagactacaac
atccagaaggagtccaccctccacctggtgctccgcctgcgtggtggtatgcagatcttt
gtgaagaccctcactggcaagaccatcaccttggaggtggagtcttccgacaccatcgac
aatgtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgtctgatc
ttcgccggcaagcagctggaggatggccgcaccctggcggactacaacatccagaaggag
tccaccctccacttggtactccgtctgcgtggtggtatgcagatctttgtgaagaccctc
actggcaagaccatcaccttggaggtggagtcttctgacaccattgacaacgtgaaggcg
aagatccaggacaaggagggcatccccccggaccagcagcgtctgatctttgctgggaag
cagcttgaggatggccgcaccttggcggactacaacatccagaaggagtccaccctccac
ttggtgctccgtctgcgtggtggtatgcagatctttgtcaagactctcaccggcaagact
atcaccttggaggtggagtcttcagataccatcgacaacgtgaaggcgaagatccaggat
aaggagggcatccctccggaccagcagcgtctgatctttgcaggcaagcagttggaggat
ggccgcaccttggctgactacaacatccagaaggagtctaccctccatctggtgctccgt
ctgcgtggtggtatgcagatctttgtcaagactctcaccggcaagaccatcaccttggag
gtggagtcttcagataccattgacaatgtgaaggcgaagatccaggacaaggagggcatc
cccccggaccagcagcgtctgatcttcgccggcaagcagctggaggatggccgcaccctg
gcggactacaacattcagaaggagtcgacccttcacctggtgctccgtctccgtggtgga
cagtaa

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