Panicum virgatum (switchgrass): 120704273
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Entry
120704273 CDS
T07260
Name
(RefSeq) synaptotagmin-3-like isoform X1
KO
K28063
extended synaptotagmin
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120704273
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
120704273
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
SMP_LBD
SMP_MUG190-like
CEP76-C2
Motif
Other DBs
NCBI-GeneID:
120704273
NCBI-ProteinID:
XP_039844533
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Position
4K:44575245..44582644
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AA seq
538 aa
AA seq
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MGLVGGVLGFCVCLPVGLAAAYFLYLRYFAARRLQDPVIRPLRDLDSETLQTTIPDIPLW
VKSPDYERIDWMNKFIFDMWPFLDKAICNNIKRAMRPIFDQYDGQYGIESIEFEELTLGA
LPPTFQGIKVYEMLEKVLVIEPVIRWASIANVILNAKVHSFNVSVQLEDLHIMLTPRVTL
KPLVPSFPCFANLCVSLMEKPRIDFGLKLLGGDIMAIPGLYHYVQDQISKQISVLYHWPK
VIQIPILDGVSGATKKPVGILHVKVIRALNLLKMDLLGKSDPYVKMRLSGERLPSKKTSV
KMRNLNPEWNEHFRFIVKDPNTQVLELHMFDWEKVKMHDKLGMQVIPLRLLTPYESKLFT
LDLVRSMNPNDPHNKKNRGQLIVELTFDPFREDNSRTSVALDGEGNASIREGNGESSGGV
LLVSVENAEDVEGKQHTNPYAEVLFRGERKKTKVIRKTRDPRWSEEFQFMVDEPPVEDKV
HIEVKSKRRGLPFRNKESLGHVNINLVDVVNNGRINEKYHLINSRNGMIQVEIKWSTV
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgggcctcgtgggcggcgtcctcggcttctgcgtctgcctccccgtcgggcttgccgcc
gcctacttcctctacctccgctacttcgccgctcgccgcctccaggatcctgtcattaga
cctctacgagatttagattccgaaaccctacagacaacaataccagatattccattatgg
gtgaagagcccagactatgagcggattgattggatgaacaagtttatttttgacatgtgg
cctttcctggataaggcaatatgcaacaatataaaacgtgcaatgagaccgatattcgat
caatatgatggacaatatggtatagaatccattgaatttgaagagttgacactcggggca
cttccccctacatttcaaggtattaaagtttatgaaatgctagaaaaagtattggtaatt
gagcctgtgattcggtgggctagcatagcaaatgtaatcctgaatgcaaaggtgcattct
ttcaatgtgtctgttcagcttgaagatttgcatataatgctaactcctcgtgtgactctc
aagccacttgtgccaagctttccctgttttgctaacttatgtgtgtcattaatggagaag
ccacgtatagattttggactcaaattgttgggaggagatatcatggcaataccagggttg
tatcattatgttcaggatcaaatatcaaagcaaatctcagttctgtaccattggcctaag
gttattcagattccaatcttagatggagtaagtggcgctacaaagaagccggttggaatc
ttgcatgtaaaggtaataagagccctgaatcttctcaagatggacttgcttggaaagtct
gatccctatgtcaagatgcgcctgagtggtgaaaggctgccctcaaagaaaacatctgtt
aagatgagaaacttgaatcctgaatggaatgaacacttcaggttcatagtcaaggatcct
aatactcaagtccttgagctccacatgtttgactgggaaaaggttaagatgcacgataaa
ttgggtatgcaagtaattcccctccgcttgcttacaccttacgagagcaagctattcaca
ctcgaccttgttcgaagcatgaatccaaatgatccgcataacaagaaaaatagaggacag
ctcattgttgagttgacatttgatcccttccgagaagacaatagcaggaccagtgtggct
ttggacggtgaaggtaatgcaagcataagggaaggaaacggtgaatccagtggtggggtg
ttgttggtttcagtagaaaatgcagaagatgtcgaagggaagcagcacactaatccatat
gctgaggttcttttcaggggagaacggaagaaaacaaaggtgataaggaaaacaagagat
ccaagatggagcgaggagttccagttcatggtagatgagcctccagtggaagataaggtc
catatcgaagttaaaagcaaacgtcgcgggcttcccttccgcaacaaggaatccctaggg
cacgtgaatataaacctggtggatgtggtgaacaatggccggatcaacgagaaataccac
ctgatcaactcgaggaacgggatgatacaagtcgagatcaaatggagcacggtgtga
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