Panicum virgatum (switchgrass): 120707684
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Entry
120707684 CDS
T07260
Name
(RefSeq) 3-isopropylmalate dehydratase large subunit, chloroplastic-like isoform X1
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00290
Valine, leucine and isoleucine biosynthesis
pvir00660
C5-Branched dibasic acid metabolism
pvir00966
Glucosinolate biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01210
2-Oxocarboxylic acid metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
120707684
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
120707684
09110 Biosynthesis of other secondary metabolites
00966 Glucosinolate biosynthesis
120707684
Enzymes [BR:
pvir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
120707684
4.2.1.35 (R)-2-methylmalate dehydratase
120707684
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Motif
Pfam:
Aconitase
Motif
Other DBs
NCBI-GeneID:
120707684
NCBI-ProteinID:
XP_039848624
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Position
1K:complement(2246384..2250802)
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AA seq
510 aa
AA seq
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MAASVSAAAKASAAFAHKKELAAAAPAPAQHRAGSGRRSNPCRVRAVASPARAPRAPAST
GSVKSAMTMTEKILARASERAGLEPGENVWVDVDVLMTHDVCGPGTIGIFKKEFGEDAKV
WDREKVVIIPDHYIFTSDERANRNVDILRDFCMEQNINYFYDIKDLSNFKANPDYKGVCH
VALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGIGNTDAGFVLGTGKALLKVPPTIRFV
LDGEMPPYLLAKDLILQIIGEISVSGATYKSMEFVGSTVESLNMEERMTLCNMVIEAGGK
NGVVPADETTFKYLEGKTSVDYEPVYSDAQARFFSDYRFDVSKLEPVVAKPHSPDNRVLA
RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDLYSLPV
PGSGGKTCSQIFEEAGCDTPASPSCGACLGGPRDTYARMNEPMELPGQDGTQGGADLSGI
PVHGGCLGPDGLRHRPQGLPHVTTLKPQSS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctccgtctccgctgccgccaaggcctccgccgccttcgcccacaagaaggag
ctcgccgcggcggcgccggcgccggcgcagcaccgcgcgggctcgggccgccggagcaat
ccatgccgcgtgcgcgccgtcgcttcgcccgcgcgcgcgccccgcgccccggcgtccacc
ggctcggtgaagtccgcgatgacgatgacggagaagatcctggcgcgggcgtcggagcgc
gcgggcctggagcccggggagaacgtctgggtggacgtcgacgtgctcatgacgcacgac
gtctgcggccccggcaccatcggcatcttcaagaaggagttcggggaggacgccaaggtc
tgggaccgcgagaaggtcgtcatcatcccggaccactacatcttcaccagcgacgagcgg
gccaaccgcaatgttgatatcctcagggacttctgtatggagcagaacatcaattacttc
tatgacatcaaggacctcagcaatttcaaggctaatccagactacaaaggcgtctgccac
gttgcacttgctcaagaaggccactgccgaccgggcgaggttctccttggtactgattct
catacatgcaatgctggagccttcggtcaatttgcaacgggaattggaaacactgatgca
ggttttgtattgggcactggaaaggctcttctcaaggtgccaccaactataaggtttgta
ctagatggagaaatgccaccttatttactcgcaaaggatctgattttgcaaattattggt
gagatttctgtatctggtgcaacctacaagtccatggagtttgttggatcaactgtggaa
agtctaaatatggaagagcgaatgacattgtgcaacatggttattgaagctggtggaaag
aatggtgttgtgcctgctgatgaaactacatttaagtaccttgagggcaagacatccgtt
gattatgaacctgtctacagtgatgctcaggccagattttttagtgactatcggtttgat
gtatccaaactggagccagtagttgccaagccacattcacctgacaaccgtgttctagca
agagaatgcaaagatgtcaagattgaccgagtttatattggttcttgcactggtggtaag
acggaggacttccttgctgctgcaaaggtgttcttagcttcgggcaagaaggttaaagtc
cccacattccttgtccctgcgacacaaaaggtgtggatggacttatatagcctccctgta
ccaggatctggtgggaaaacttgctcccagatatttgaggaggctggatgcgacacacca
gctagccctagttgtggtgcttgtttaggtggccctcgcgatacatatgcacgcatgaat
gaaccgatggaacttcccgggcaggatgggacacaaggaggggcagatctatctggcatc
cccgtacacggcggctgcctcggccctgacgggctacgtcacagaccccagggacttcct
catgtaacgaccttgaaaccacagagttcatga
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