KEGG   Panicum virgatum (switchgrass): 120708024
Entry
120708024         CDS       T07260                                 
Name
(RefSeq) carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
  KO
K17913  carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase [EC:1.13.11.69 1.13.11.70]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00906  Carotenoid biosynthesis
pvir01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00906 Carotenoid biosynthesis
    120708024
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.13  Acting on single donors with incorporation of molecular oxygen (oxygenases)
   1.13.11  With incorporation of two atoms of oxygen
    1.13.11.69  carlactone synthase
     120708024
    1.13.11.70  all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
     120708024
SSDB
Motif
Pfam: RPE65
Other DBs
NCBI-GeneID: 120708024
NCBI-ProteinID: XP_039849044
LinkDB
Position
5K:complement(48275216..48279005)
AA seq 582 aa
MSPTMASSLSVFAAMSGVAAGRPAGSSGAAVPGRLATSQQGGGKGKRAVAQPLAASAATE
TPAPAPVAAPALPAGRPAVVDAPRRRGGRGAGSGHAAWKSVRQERWEGALEVEGELPLWL
DGTYLRNGPGLWNLGDYGFRHLFDGYATLVRVSFRNGRAVGAHRQIESEAYKAARAHGKV
CYREFSEVPKPDSFLSAVGQLATLFSGSSLTDNSNTGVVCLGDGRVLCLTETIKGSIVVD
PDTLDTLGRFEFSDKLGGLIHSAHPIVTATEFWTLIPDLIRPGYSVVRMDAGTNERRFVG
RVDCRGGPAPGWVHSFPVTEHYVVVPEMPLRYCAKNLLRAEPTPLYKFEWHLESGSYMHV
MCKASGRVVASVEVPPYVTFHFINAYEETDEEGRVTAIVADCCEHNADTSILDKLRLQNL
RSFAGQDVLPDARVGRFRIPLDGSPFGELEAALDPEEHGRGMDMCSINPAHVGKKYRYAY
ACGAHRPCNFPNTLTKIDMVEKTAKNWYEEGTVPSEPFFVPRPGAVEEDDGVAISMVSAR
DGSAYALVLDAKTFQEVARAKFPYAMPYGLHCCWVPRNSNAC
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgtctcccacgatggcatcgtcgctcagtgtattcgcggcgatgtccggcgtcgccgcc
gggcggcctgctggcagcagtggcgcggcggtgcccggtcgtctggcgaccagccagcag
gggggcggcaagggcaagcgcgccgtggcgcagcctctcgcggctagcgccgcgacggag
acgccggcgccggcgccggtcgcagccccggccctgccggcgggtaggcccgcggtcgtc
gacgccccgcgccgccgtggaggccgcggcgccggcagcgggcacgcggcgtggaagagc
gtccggcaggagaggtgggagggggccctggaggtggaaggggagctgccgctctggctg
gacggcacgtacctgaggaacgggccgggcctgtggaacctgggcgactacggcttccgg
cacctgttcgacgggtacgcgacgctggtgcgcgtctcgttccgcaacgggcgcgcggtg
ggcgcgcaccggcagatcgagtcggaggcgtacaaggcggcgcgcgcgcacggcaaggtg
tgctaccgcgagttctccgaggtgcccaagcccgatagcttcctctccgccgtgggccag
ctcgccaccctcttctcgggctcctcgctcaccgacaactccaacacgggcgtcgtctgc
ctcggcgacggccgcgtcctctgcctgacggagaccatcaagggctccatcgtggtcgac
ccggacacgctcgacaccctcggcaggttcgagttctcggacaagctggggggcctcatc
cactcggcgcaccccatcgtgaccgccaccgagttctggacgctgatcccggacctgatc
cggccgggctactcggtcgtgaggatggacgccgggaccaacgagcggcggttcgtcggc
agggtggactgccgcggcggccccgcgcctgggtgggtgcactcgttccccgtcaccgag
cactacgtggtggtgccggagatgccgctccggtactgcgccaagaacctcctccgcgcg
gagcccacgccgctgtacaagttcgagtggcacctcgagtccggcagctacatgcacgtc
atgtgcaaggccagcggcagggtcgtggccagcgtggaggtgccgccgtacgtgacgttc
cacttcatcaacgcgtacgaggagacggacgaggaggggcgcgtgacggccatcgtcgcc
gactgctgcgagcacaacgccgacacctccatcctcgacaagctccgcctccagaacctc
cgatccttcgccggccaggacgtcctccccgacgccagggtgggccggttcaggatcccg
ctggacgggagcccgttcggggagctggaggcggcgctggaccccgaggagcacggccgg
gggatggacatgtgcagcatcaacccggcccacgtcggcaagaagtaccggtacgcctac
gcctgcggcgcccaccggccgtgcaacttccccaacaccctcaccaagatcgacatggtg
gagaagacggccaagaactggtacgaggagggcaccgtgccgtccgagcccttcttcgtg
ccgcgccccggcgccgtggaagaggacgacggggtggcgatctcgatggtgagcgccagg
gacgggtcggcctacgcgctggtgctggacgccaagacgttccaggaggtcgcgcgggcc
aagttcccgtacgcgatgccctacggcctgcactgctgctgggtgccccggaactcgaac
gcctgctag

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