Panicum virgatum (switchgrass): 120708416
Help
Entry
120708416 CDS
T07260
Name
(RefSeq) proteasome subunit alpha type-3-like
KO
K02727
20S proteasome subunit alpha 7 [EC:
3.4.25.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120708416
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120708416
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120708416
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
120708416
Peptidases and inhibitors [BR:
pvir01002
]
Threonine peptidases
Family T1: proteasome family
120708416
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
120708416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
RecA_C
Motif
Other DBs
NCBI-GeneID:
120708416
NCBI-ProteinID:
XP_039849588
LinkDB
All DBs
Position
5K:52210676..52214464
Genome browser
AA seq
249 aa
AA seq
DB search
MSSIGTGYDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMML
EGSNRRIHSVHRHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEAISVKELADRVASYV
HLCTLYWWLRPFGCGVILGGYDTDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEKLK
LSELTCREGIVEVAKIIYGVHDEAKDKAFELELSWVCDESNRQHQKVPNDLLEQAKAAAQ
AALEEMDAD
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcataggcacaggttacgatctgtcggttaccaccttctctccggatggccgt
gtcttccaggtcgagtacgccaccaaggctgtcgacaacagcgggactgttgtcgggatc
aagtgcaaagatggcattgtcctgggtgttgagaagctggtaacttcaaagatgatgctg
gaggggtccaaccggaggatccattcagtgcaccgccactctggcttggctgttgctggc
ttagcggcagatggcaggcaaattgtttcaagggccaaatcagaagctgctagttatgaa
aaggtctacggggaagccatttctgtgaaggaattggcagatcgtgtggcaagttatgtt
catctttgcacgttgtactggtggctcaggccgtttggttgtggcgttattcttggaggt
tatgatacggatgggccacaactctacatgattgagccctcaggagtctcctacaaatac
tttggtgctgcattggggaagggaagacaggctgcaaaaactgagatagagaagctgaag
ctttcggagcttacctgccgggaaggcattgttgaagttgcaaagataatttatggagtg
catgacgaagctaaggacaaagctttcgagttggagttgagctgggtctgtgatgaatca
aaccgccagcatcagaaggtaccaaatgatctgttggaacaggccaaggctgctgctcag
gcggctctggaggaaatggatgccgactaa
DBGET
integrated database retrieval system
