Panicum virgatum (switchgrass): 120712619
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Entry
120712619 CDS
T07260
Name
(RefSeq) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00900
Terpenoid backbone biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120712619
Enzymes [BR:
pvir01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
120712619
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Motif
Pfam:
YgbB
Motif
Other DBs
NCBI-GeneID:
120712619
NCBI-ProteinID:
XP_039854389
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All DBs
Position
1K:complement(46220395..46222556)
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AA seq
225 aa
AA seq
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MATASSLFLASSPISTAPRTRTGPAASCPPAARPSLRLRQRPSPAVAAAVQAEHQPAVAA
APKPPALPFRVGHGFDLHRLEPNLPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGAL
GLPDIGQIFPDSDLRWKGADSSVFMREAVKLMHEAGYELGNLDATLILQKPKLSPFKETI
RSNLCDLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRK
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcctcctccctcttcctcgcctcgtcccccatctccaccgcgccgcgaacc
cgcaccggccccgcggcgtcctgccctcccgccgcccggccgtccctgcgcctccggcag
aggccgtccccggccgtcgcggccgccgtgcaggccgagcaccagcccgccgtggccgca
gcgccgaagccgcccgcgctcccgttccgcgtcggacacgggtttgacctccaccgcctc
gaaccgaacctcccgctcatcatcggcggcatcaacatcccccacgaccgtggctgcgag
gcccactccgacggggacgtgctgctgcactgcgtggtggacgcgattctcggcgcgctg
gggctgccagacatcgggcagatcttcccagactcggacctacggtggaagggtgccgat
tcttccgtgttcatgagggaagctgtgaaattgatgcatgaagcgggctatgagctgggc
aaccttgatgctacactgatcttgcaaaaaccaaaactcagtccattcaaggagacaatc
cgatccaacttgtgtgacctacttggggcagatccatctgtcgtcaatctcaaggccaag
actcacgagaaagttgacagtctaggggaaaacaggagcatagctgcccatactgtagtt
ctcctgatgcggaagtag
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