Panicum virgatum (switchgrass): 120712629
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Entry
120712629 CDS
T07260
Name
(RefSeq) alpha-amylase isozyme 3D
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120712629
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
120712629
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Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
120712629
NCBI-ProteinID:
XP_039854403
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Position
6K:complement(40319803..40321995)
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AA seq
432 aa
AA seq
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MKHSSSLCLLFFLVALCSLVQAQVLFQGFNWESYKKQGGWYNSLKAQVDDIVKAGVTHVW
LPPPSHSVSPQGYMPGRLYDLDASQYGTAAELKSLIAAFHGRGIQCVADIVINHRCAEKK
DARGVYCIFEGGTPDDRLDWGPAMICSDDTQYSDGTGHRDTGEGFGAAPDVDHLNARVQR
ELTDWLNWLKSDVGFDGWRLDFAKGYSPAIASMYVENTKPSFVVAEIWNSLSYTDGKPSA
NQDQCRQELVDWVDAVGAPAMAFDFPTKGLLQAGVQGELWRLRDGSGKAAGVIGWAPERA
VTFVDNHDTGSTQKLWPFPSDKVMQGYAYILTHPGVPCIFYDHMFDWNLKQEISTLAAIR
ARNGIHAGSKLRILLADADAYVAVVDDKVMVKIGTRYDVGSVIPSDFHPAAHGKDYCVWE
KGSLRVPAGRHL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaagcattcgagcagcttgtgcctgctcttcttcctcgtggccctctgcagcctggtc
caggcacaggtcctcttccaggggttcaactgggagtcgtacaagaaacagggcggctgg
tacaacagcctcaaggcccaggtcgacgacatcgtcaaggccggcgtcacgcacgtctgg
ctgcctcctccctcgcactccgtctccccacaaggttacatgccggggcgcctgtacgac
ctggacgcgtcgcagtacggcacggcggcggagctcaagtccctgatcgcggcgttccac
ggcaggggcatccagtgcgtcgccgacatcgtcatcaaccaccggtgcgcggagaagaag
gacgcgcgcggcgtctactgcatcttcgagggcgggacgcccgacgaccgcctcgactgg
ggccccgccatgatctgcagcgacgacacccagtactcggacggcacgggccaccgcgac
accggcgaggggttcggcgccgcgcccgacgtcgaccacctcaacgcgcgcgtccagcgg
gagctcaccgactggctcaactggctcaagtccgacgtcggcttcgacggctggcgcctc
gacttcgccaagggctactccccggccatcgccagtatgtacgtggagaacacgaagccg
agcttcgtggtggccgagatatggaactccctgagctacacggacggcaagccgtcggcg
aaccaggaccagtgccggcaggagctggtggactgggtggacgcggtcggcgcgccggcg
atggcgttcgactttccgaccaaggggctgctgcaggcgggcgtgcagggggagctgtgg
cggctgcgcgacggctccggcaaggctgccggcgtgatcgggtgggcgccggagagggcc
gtcacgttcgttgacaaccacgacaccgggtcgacgcagaagctctggccgttcccgtcc
gacaaggtgatgcagggctacgcctacatcctcacgcatccaggggttccctgcatcttc
tacgaccacatgttcgactggaacctgaaacaggagatatcgacgctggccgcgatcagg
gctcgcaacggcatccacgccgggagcaagcttcgaatcctcctggcggacgccgatgcg
tacgtggccgtcgtcgacgacaaggtcatggtgaagatcgggacgaggtacgacgtcggc
agcgtgatcccgtcggatttccaccccgcggcgcacggcaaggactactgcgtctgggag
aagggcagcctccgcgtcccggcagggcgccacctttag
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