KEGG   Panicum virgatum (switchgrass): 120712629
Entry
120712629         CDS       T07260                                 
Name
(RefSeq) alpha-amylase isozyme 3D
  KO
K01176  alpha-amylase [EC:3.2.1.1]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00500  Starch and sucrose metabolism
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00500 Starch and sucrose metabolism
    120712629
Enzymes [BR:pvir01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.1  alpha-amylase
     120712629
SSDB
Motif
Pfam: Alpha-amyl_C2 Alpha-amylase Glyco_hydro_70
Other DBs
NCBI-GeneID: 120712629
NCBI-ProteinID: XP_039854403
LinkDB
Position
6K:complement(40319803..40321995)
AA seq 432 aa
MKHSSSLCLLFFLVALCSLVQAQVLFQGFNWESYKKQGGWYNSLKAQVDDIVKAGVTHVW
LPPPSHSVSPQGYMPGRLYDLDASQYGTAAELKSLIAAFHGRGIQCVADIVINHRCAEKK
DARGVYCIFEGGTPDDRLDWGPAMICSDDTQYSDGTGHRDTGEGFGAAPDVDHLNARVQR
ELTDWLNWLKSDVGFDGWRLDFAKGYSPAIASMYVENTKPSFVVAEIWNSLSYTDGKPSA
NQDQCRQELVDWVDAVGAPAMAFDFPTKGLLQAGVQGELWRLRDGSGKAAGVIGWAPERA
VTFVDNHDTGSTQKLWPFPSDKVMQGYAYILTHPGVPCIFYDHMFDWNLKQEISTLAAIR
ARNGIHAGSKLRILLADADAYVAVVDDKVMVKIGTRYDVGSVIPSDFHPAAHGKDYCVWE
KGSLRVPAGRHL
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgaagcattcgagcagcttgtgcctgctcttcttcctcgtggccctctgcagcctggtc
caggcacaggtcctcttccaggggttcaactgggagtcgtacaagaaacagggcggctgg
tacaacagcctcaaggcccaggtcgacgacatcgtcaaggccggcgtcacgcacgtctgg
ctgcctcctccctcgcactccgtctccccacaaggttacatgccggggcgcctgtacgac
ctggacgcgtcgcagtacggcacggcggcggagctcaagtccctgatcgcggcgttccac
ggcaggggcatccagtgcgtcgccgacatcgtcatcaaccaccggtgcgcggagaagaag
gacgcgcgcggcgtctactgcatcttcgagggcgggacgcccgacgaccgcctcgactgg
ggccccgccatgatctgcagcgacgacacccagtactcggacggcacgggccaccgcgac
accggcgaggggttcggcgccgcgcccgacgtcgaccacctcaacgcgcgcgtccagcgg
gagctcaccgactggctcaactggctcaagtccgacgtcggcttcgacggctggcgcctc
gacttcgccaagggctactccccggccatcgccagtatgtacgtggagaacacgaagccg
agcttcgtggtggccgagatatggaactccctgagctacacggacggcaagccgtcggcg
aaccaggaccagtgccggcaggagctggtggactgggtggacgcggtcggcgcgccggcg
atggcgttcgactttccgaccaaggggctgctgcaggcgggcgtgcagggggagctgtgg
cggctgcgcgacggctccggcaaggctgccggcgtgatcgggtgggcgccggagagggcc
gtcacgttcgttgacaaccacgacaccgggtcgacgcagaagctctggccgttcccgtcc
gacaaggtgatgcagggctacgcctacatcctcacgcatccaggggttccctgcatcttc
tacgaccacatgttcgactggaacctgaaacaggagatatcgacgctggccgcgatcagg
gctcgcaacggcatccacgccgggagcaagcttcgaatcctcctggcggacgccgatgcg
tacgtggccgtcgtcgacgacaaggtcatggtgaagatcgggacgaggtacgacgtcggc
agcgtgatcccgtcggatttccaccccgcggcgcacggcaaggactactgcgtctgggag
aagggcagcctccgcgtcccggcagggcgccacctttag

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