Penaeus vannamei (Pacific white shrimp): 113802455
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Entry
113802455 CDS
T06111
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm02010
ABC transporters
pvm04146
Peroxisome
pvm04977
Vitamin digestion and absorption
pvm04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113802455
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
113802455
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
113802455
04980 Cobalamin transport and metabolism
113802455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvm04131
]
113802455
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvm02000
]
113802455
Enzymes [BR:
pvm01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
113802455
Membrane trafficking [BR:
pvm04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
113802455
Transporters [BR:
pvm02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
113802455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_16
AAA_29
AAA_22
Motif
Other DBs
NCBI-GeneID:
113802455
NCBI-ProteinID:
XP_069984740
LinkDB
All DBs
Position
13:3515597..3544190
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AA seq
672 aa
AA seq
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MANTKQECESPFLMFYKRNSGYVSLRKRVLLKVQTSTPPSAMGKVETPKEKAGFDLHMFR
RLWKIVRIIIPGWCSLPAGLFFLLLFLCALEQYLGYFMGLVASKYYAVFGDRNFDGFIMH
TLKTCALILAISSVISVKLYINSVLYITWRQLLDRALHRLYFSGINYYTLNVLDSNVDNP
DQRMTQDVDKLCSSLATITTKVIIAPFQIGYYTYKTYVGTGWLGPVSIYAFFFVGTIVNR
IVMSPIVKFVMKQEKCEGDFRFKHMQVRVNSESIAFHVSGPVESCKTNRALDILVRAQQR
LFNRQIILNFTRYMFDYFGSIISYLAISIPIFSGKFGEDEDISSVVSAYAFVSMYLVFSL
TSLVDLGSQVVVLSGVTHRVAQLVERLLKLQHEWDINTLQASSSFTNITQNLRKRSGSRD
SSASSSDSRRLIEDSPENEVAVCGEDQTSLDIAFILRDVTISAPGSNTVLVSDLQLVIKK
GESLLIMGPSSAGKSSILRVLRGLWPAARGTVAHDFPPGPKSVIFLPQKPLMTNGSLLEQ
IIYPLRLDPNSPISSETCEEIKSRLDALHMSELVARCGGLQTDPDWNWNDALSPGEMQRV
CFLRILYHKPQFALLDEATSALSLDVEEQLYQACLDQNITIISVAHRESLIKYHNYLLTL
DGKGGWKKEQVS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggctaatacgaagcaagaatgcgaatcgccttttttgatgttctataaacgaaattct
gggtacgtctctctgcgcaagcgcgttcttctgaaggtgcagacgtcgacgccgccttca
gccatggggaaagtggagacgccgaaggagaaggcgggcttcgacctgcacatgttccgc
cgcctctggaagatcgtcagaatcatcatccccggctggtgctctctgccggcgggactc
ttcttcctcctgctcttcctgtgcgcgctagaacagtatcttggatatttcatgggtctt
gttgcaagtaaatactatgcagtgtttggcgacagaaacttcgacggtttcataatgcac
acccttaaaacctgcgctttgatattggccatttcatctgtgataagcgtaaagctgtat
atcaacagcgtattatacatcacctggagacaactgcttgatagagctctccatcgcctc
tacttctcagggatcaactactacacgctcaatgttcttgattctaatgttgataaccca
gaccagcgcatgacccaggacgttgacaaattgtgttcgtcattggcaacaataacaaca
aaggttataatagcaccatttcagattggctattacacttataaaacttatgtaggaaca
ggatggcttggcccagtcagcatctacgccttcttttttgtcggcacaatagtcaaccgc
atcgtcatgtctcccatcgtgaagtttgtcatgaagcaagaaaaatgcgagggagatttc
aggtttaagcatatgcaagtacgtgtgaattccgaatcaatagccttccacgtctctggg
ccagttgaatcttgcaagacaaaccgagctttggacatcttagtgcgagcacagcagagg
ctcttcaatagacagataattttgaacttcacaagatatatgtttgactactttggttcc
atcatttcctatctggccatttcaatccccatttttagtgggaaatttggtgaagacgaa
gatatttcatccgtcgttagtgcctacgccttcgtctcaatgtacctggtgttcagcctg
acctcacttgtggacttgggcagtcaagtagtggtattatcaggtgtgacgcatcgtgtt
gctcagttggtcgagaggctgctcaaacttcagcatgaatgggatattaatacacttcag
gcctcctcttcctttactaacataacacagaatctccgaaagcgatctgggtcaagagat
agcagtgcgtcctctagtgactcaaggcgccttatagaggactctcctgaaaatgaagtc
gcagtttgtggggaagatcagacatcgttagatattgctttcattctcagagatgtcacc
atttcagccccaggatcaaatacagtattggtttcagatttgcagctggtcatcaagaaa
ggtgaaagtcttctgatcatgggaccaagttctgctggaaagtcgagcatcctgagggta
ttacgtggattgtggccggctgcccgaggtaccgtggctcatgacttcccaccaggacct
aagtctgtgattttccttccacagaaacctcttatgactaatggatctttattggaacag
atcatctatccactgcgactggaccccaatagtcccattagctcagagacatgcgaggag
atcaagagtcgtttagatgcgcttcatatgagtgagttggttgctaggtgtggtggtctc
caaacagatccagactggaattggaatgatgccttatcaccaggagagatgcagcgtgtg
tgtttccttcgcattctttaccacaagccacagttcgctttgctagacgaggccacaagt
gctctgagcctcgatgtcgaagaacagttatatcaagcctgcctggaccagaacatcacg
attattagcgttgcacatcgagagtccctcattaagtatcataattatttactcactctt
gacggcaagggaggatggaagaaggagcaagtgagttag
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