Penaeus vannamei (Pacific white shrimp): 113804199
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Entry
113804199 CDS
T06111
Name
(RefSeq) Werner syndrome ATP-dependent helicase homolog
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvm03032
]
113804199
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113804199
Enzymes [BR:
pvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113804199
DNA replication proteins [BR:
pvm03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
113804199
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
113804199
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
RQC
HRDC
RecQ_Zn_bind
DUF4719
Motif
Other DBs
NCBI-GeneID:
113804199
NCBI-ProteinID:
XP_027210832
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MDDKKGSALDCTTVYEEETLPSGIPPPSKHHLEMLQKAFGHASFRPMQWKIIHAVLQGLD
NCVVMATGSKELCFQFPPVYTGVWAVVVSPLISLMQDQVLALQVSSNIGACYLGSAQKNK
SEVYTEMFAGMYRIVYVTPEFIDACPDVLKTLNKRVGISLFAVDEAHCVSQWGHDFRHTY
RRLGVLRTDFPKIPILAVTATATKTVREDICTSLGLRSPEITITSFDRPNLYLEVKNKVK
GIVENFTPFLVKESYGRYTTDGPTIVYCPTKKSTEEVYQALAGLGVKCVKYHAGMTPLQR
DEAHKQFMYDKADLIVATIAFGMGINKPDVRQVIHYGASSNHESYYQEIGRAGRDGLPSV
CTVLYAPEDFAVHRYFLSQIKNQRYQERRREMMTRMEKFLTITTCRRAEILSHFTSRPPG
NTPKSDCCDNCTRILSGGGVSKGQSRVEAALDDEGKYDFTVDAINLLKAADGCNGQCAVG
SLILVLKGSNNQRVRPQWKRIESFGAGKKRSDSYWKALCKMLVFAGYLSETTISGGGGGR
GRGGWGRGTSTFAYDAIGITREGDRALSNPNCKIFLKPSTTMLDELRYVIAIKRPTASDP
TPVVGRRKFTPSEFLCRGLSNLQKPVQMSSVKAENKDDSTEKSGTSKEEAAPVDPREEEL
KVKLYQSLIELRNQLGEETGFMPYLVATNRVLLQLAQTRPSTLSTLRKTEGIPEVKVQKF
GPAIVKHIKEFCMKHNLSYQSECDDGKDLTNSKDEESKPSTSNKASSFVSSKKLYTSQPS
LDTFKYNPSKASNSSGWISSKVKVSKSPSQEEDSQEDKGLPIMREGDEDTQGGSVRNHSK
EAVSQLSKGTKGTASSPSRDKDRCGNVEEVGTNNEDAKSKYFVPSLDSLDADADFFEAEE
EDSNSNSFFSGQKKKDTLLEKKNNDLDHKTGDSKKDKDDSKPALDRSQSFAKSKLAPKKR
GIAYDDTDSEKEETNSQDSQEKYERILADTKKKMESSGWIDAKRMKKKMKSNSLFKR
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaagaaagggtcagcactggactgtacgacagtatacgaggaggagacacta
ccctcgggaatccctcctccttccaagcaccacttggaaatgcttcagaaggcctttggc
catgcatcctttaggccaatgcagtggaagatcatacatgctgtgttgcaaggtcttgac
aactgtgtagtgatggcaacaggctcgaaagagctgtgtttccagttcccgccagtgtac
acaggggtgtgggcagtggtcgtctcacctttgatctcccttatgcaggaccaagtacta
gctcttcaggtgagctctaacataggagcatgctacttagggagtgctcagaaaaataag
tctgaagtgtacacagagatgtttgcagggatgtacagaattgtatacgtcactccagaa
tttatcgatgcctgtcctgatgtgttgaagacactcaataagagagttggaatatcactg
tttgctgtggatgaggctcactgtgtaagccagtggggacatgacttcaggcatacgtac
aggcgactgggagttctcaggacagattttccgaagattcccattttagctgtcactgcc
acagctactaagacggtgcgggaggacatctgcacgtctcttggcctgaggtcaccagag
attaccatcactagtttcgataggccgaacctttatctggaggtgaagaacaaagtgaag
ggtattgtagagaacttcactcccttcttggtcaaagaaagttatgggagatacaccaca
gatggacctaccattgtgtactgtcccactaagaaaagtactgaagaggtgtatcaggct
ttggcaggtttgggtgtaaagtgtgtaaagtaccatgcaggtatgacaccattgcagcga
gacgaagcacacaagcagtttatgtatgacaaggcggatctgattgttgccaccattgca
tttggcatgggtataaacaaacctgatgttcggcaagtcatccactatggagcatcaagt
aaccatgagtcttactatcaagagataggtcgtgcaggacgagatggccttccatctgta
tgtaccgttctctatgcacctgaagactttgcagtgcatcgttactttctgagccagata
aagaatcagcgatatcaggaacgccggagagagatgatgactaggatggagaagttccta
accataacaacctgtagacgagcagagatcctctcccactttacatcccgacccccaggc
aatactccaaagagtgactgctgtgacaactgcactcgcatactgtcaggtggaggagtc
agcaagggtcagagcagagttgaagcagcacttgatgatgaaggaaaatatgacttcacc
gtggatgccatcaatcttttgaaggcagcagatggttgtaatggacagtgtgcagtaggg
tcactcatccttgtgctgaaaggttcaaacaaccaacgggttcgaccgcagtggaagaga
atagagtccttcggtgcgggtaaaaagaggagtgattcgtactggaaggctctgtgcaag
atgttggtctttgctggctatctctctgagactaccataagcggagggggtggtggaagg
gggaggggaggatgggggaggggtacctcgacattcgcttatgatgccatcgggatcacc
agggaaggagatagggcgctgagtaaccccaactgcaagatcttcttaaaaccctcgacc
acaatgcttgatgagttgcgttatgttatagcaataaagagaccaacggcttcagacccg
acccctgttgttgggcgtcgcaagttcactccaagtgaattcctttgccggggcctctcc
aacttgcagaagccagtgcagatgtcgagcgtaaaggcagagaacaaggacgacagtacg
gaaaagagtggaaccagcaaggaagaggcagcaccagtcgatcctcgggaagaagaacta
aaggttaaactgtaccagtcattgattgaattgcgtaaccaactgggagaagagactgga
ttcatgccgtacttggtagccacaaacagggtcttgctgcagctcgctcagaccagacca
tcgacacttagtacattgcgcaagactgaaggcatacctgaagtaaaggtgcagaaattt
ggtcctgcaatagttaagcacattaaagagttttgtatgaaacataatctttcatatcaa
agtgaatgtgatgatgggaaggatttgacaaacagcaaagatgaagaatcaaaaccatca
actagcaataaagctagcagttttgtatcatccaagaagctctacacatcgcagccttct
ctggatacttttaaatataatccctcaaaggccagtaattcatcaggctggatatcgtcc
aaagtcaaggtttccaaatctccatcacaggaggaagattcacaagaggacaaaggactg
ccgattatgagggaaggtgatgaggatacccagggaggcagtgtgagaaatcattccaaa
gaggcagtgagtcagttgagcaaagggactaaaggcacagcatcatcgcccagtagagat
aaggatagatgcggtaatgttgaagaagttggtacaaacaatgaggatgccaaatcaaag
tatttcgttcccagcttggactcattagacgctgatgctgatttctttgaagcagaagaa
gaagacagcaatagcaacagcttcttcagtggtcaaaagaaaaaagataccttgttagaa
aagaaaaataatgatttggatcataaaactggagacagcaaaaaagacaaagatgacagt
aaaccagcactggatagatcacagtcattcgccaaatcaaaactagccccaaagaaaaga
ggaatcgcatacgatgatactgactcagagaaggaagaaacaaactctcaggattcacag
gagaaatatgaacgcattctggctgacactaaaaagaaaatggaatcaagtggctggatt
gatgcaaaaaggatgaaaaagaagatgaagagcaattcactgtttaaaagataa
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