Penaeus vannamei (Pacific white shrimp): 113804993
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Entry
113804993 CDS
T06111
Symbol
trp
Name
(RefSeq) transient receptor potential protein
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvm04040
]
113804993 (trp)
Ion channels [BR:
pvm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113804993 (trp)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank_5
Ank
Ank_3
Ank_4
DUF4388
ANAPC_CDC26
CxC5
DUF2202
Motif
Other DBs
NCBI-GeneID:
113804993
NCBI-ProteinID:
XP_069993732
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Position
23:complement(9490988..9514759)
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AA seq
1151 aa
AA seq
DB search
MGVKNGGSTNDLTSTTSEPGLEMVEAPSDIVLTEGERKYLLYVQRGDVASVRRHLEDYKD
RPQELDINCTDPLGRSSIAIAIENENLDLLELLLKNKVKPKDSLLHAISEQYVEGVELLL
EWEEKTHKKGEPYSWESMTRETATFTKDITPLILAAHHNHYEILKLLLDRGASLPMPHDI
RCGCDECIVSTEDDSLRHSLSRINAYKALASPSLIALSSKDPIRTTFELSGELRRLQGME
HEFKTEYIELRQTVMKFAAELLDQTRTRSELSVMLNYDPDGPVWEEGEVNSLSRLKMAIK
YSQKGFVAHPNVQQLLGSIWYDGLPGFRRKTMVAQCIDILKLACMFPVLSMCYIVNPNSE
KGKFMKKPFVKFICHCASYMFFLMLLALASQRIEYLLIEWFGNAWLRSVLEDWKIRERGS
LPGLVEVCIVMYVGSLIWAEIKSLWSDGLLEYIKDLWNIIDFVTNSFFMTWILLRATSFL
LVQLDLWNGLWPWYPREQWHSFDPMLLSEGCFGAAMIFSFLKLVHIFSVNPHLGPLQISL
GRMIFDILKFFFLYTLVLFAFGCGLNQLMWYYAELEMQKCYSLPGGLPDYDNQEQACFIW
RRFANLFETSQSLFWASFGLVELDAFELTGVGSFTRFWAMLMFGSYSVINIIVLLNLLIA
MMSNSYNVISERSDTEWKFARTTLWLSYFEDGGTVPPPFNVIPTPKGIMRLFGLGEKKMR
GSMKEKSRKRAEQRHMNVMRLLVRRYITEMQRKADEKGVTEDDINEVKQDISTFRYELID
ILKNNGMNTSMVNAEESAVVGKKGRAMERRLMKGFNIGMVEGIMTEILTADKKPKNIFSK
LARAIGKKKKEDWNSRVSRASLRRDQIGSSETSLRRSQTSIRRRIQYENEKLLKSLNPDD
IAEYNPNLRSHTPTTRIAYAKFKVNTLKKEKEKQKAAEQKAVTQAKAGAANQQIEIEKKQ
ELAVKPQYKSPTPQASRSPSPAPPGPKSPPPSGPASPPPGRPKSPPPSNPKIPPPSAPPT
APPRSGPAPGKISVPAAFQQQETSAPPPRIQPPPSKAKASVPPPPAAAAPTTPTVRISEP
PVRPTSPPPASKPPQPPAAKPPQAPAAKPAPAKPAPSKPAPSRSPTPSKGGADPIPEGKS
QVTGQVRTGWL
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgaaaaatggagggagtactaacgacctcacgtcaacgacctctgaacccggg
ctggaaatggtagaggctccgtcagacatcgttctgacggaaggcgagaggaagtatcta
ctgtacgtccagcggggagatgtggcgtccgtcagaagacacctcgaagactacaaggac
agacctcaggaacttgacatcaactgcacagatcctcttgggagaagttccattgccatt
gctattgagaatgagaatttggaccttcttgaactcctcttgaagaataaggtcaagccg
aaggactcccttctccatgccatttccgagcagtatgtggagggcgtggagctcctcctc
gagtgggaagagaagacccacaagaagggagaaccttacagctgggagtccatgacccgc
gagacagccacgttcaccaaggacatcacgcccctgatcctcgccgcccaccacaaccac
tatgagatcctcaaactcctcctcgatcgcggggcttcgttgcccatgccccacgacatc
agatgcggctgcgacgagtgcatcgtatcgacggaggacgattccctccgccactccctc
tcccgcatcaacgcctacaaggccctggcgtctccctccctcatcgccctgtcttccaag
gacccgatccgcaccaccttcgagctctccggggaactgaggcgcctgcaggggatggag
cacgagttcaagacggagtacattgaacttcgccaaactgtgatgaagttcgccgccgag
ctgctggaccagacgaggaccaggagcgagctgtcggtcatgttgaactatgaccccgac
ggccccgtgtgggaggaaggcgaggtcaactctctctctcgactcaagatggccatcaag
tactcgcagaaggggttcgtagcccaccccaacgtgcagcagctcctcggttccatctgg
tacgacggcctgccagggttccgccgcaagaccatggtggcccagtgtatcgacatcctg
aagctggcctgcatgttccccgtcctgtccatgtgctacatcgtgaacccgaattctgag
aagggaaagttcatgaagaagcccttcgtgaagttcatctgtcactgcgcttcgtatatg
ttcttcttgatgctcctggctttggcttcgcaacggatcgagtacctgttaatcgaatgg
ttcggaaacgcttggttacgatcggtcctcgaggattggaagatacgagaaagaggctcc
ttgcccgggctggtcgaagtgtgcatcgtgatgtacgtcggaagtttaatatgggccgag
atcaagtccctctggagtgacggccttctggagtacatcaaggacctgtggaacatcatc
gacttcgtgaccaactcgttcttcatgacctggatcctcttgcgtgccacctcgttcctc
ctggtccagctcgacctgtggaacggactgtggccctggtatccgagggaacagtggcac
agcttcgaccccatgttgctctctgagggatgtttcggtgccgccatgatcttcagtttc
ttgaagttggtgcatatcttcagcgtgaacccgcacttgggtcccttgcaaatctctctc
ggtcgcatgattttcgatattctcaagttcttcttcttgtacactctcgtcctcttcgcc
tttggttgtggtctgaatcagctgatgtggtactacgctgagttggaaatgcagaagtgt
tacagcttgcccggaggtctgccggattacgacaatcaagaacaagcttgctttatttgg
agacgttttgccaatttattcgagacctcccagtctctcttctgggcttcctttggcctt
gtggagttagacgccttcgaactcacgggtgtcgggagtttcacgcgattctgggccatg
ttgatgttcgggtcttactcggtgatcaacattatcgttctgctgaatctcctcattgct
atgatgtccaattcgtataatgtcatctcggaacgttcggacaccgagtggaaattcgcc
aggacgaccctctggctgagctacttcgaggacggcggcactgtgcctcctcccttcaac
gtcatcccgactcccaagggcatcatgaggctcttcgggctgggcgagaagaagatgagg
ggctcgatgaaggagaagtcgaggaagcgagccgagcaacgtcatatgaacgtcatgcgt
ctgttggtgcgtcgttacatcaccgagatgcagcgaaaggccgacgagaagggcgtgacg
gaggacgacatcaatgaagtcaagcaggatatttcgactttcaggtacgaactgatcgac
attctcaagaacaatggaatgaacacctccatggtcaacgccgaggaatcagccgtggtg
ggcaagaagggccgcgccatggagcgccgcctcatgaagggcttcaacatcggcatggtg
gagggcatcatgacggagatcctgacggccgacaagaagcccaagaacatcttcagcaag
ctggcgcgcgccatcggcaagaagaagaaggaggactggaactcgcgcgtgtcccgggcc
tcgctgcgccgcgaccagatcggctcctcggagaccagcctccgccgctcgcagacgtcc
atcaggaggcgcatccagtacgagaacgagaagctgctcaagtcgctcaaccccgacgac
atcgccgagtacaacccgaacctgcgctcgcacacgcccacgactcgcatcgcctacgcc
aagttcaaggtgaacacgctcaagaaggagaaggagaagcagaaggcggcggagcagaag
gccgtgacgcaggcgaaggcgggcgccgccaaccagcagatagagatcgagaagaagcag
gagctggccgtcaagccgcagtacaagtccccgacgccgcaggccagcaggtcgcccagc
cccgctcccccggggcccaagtccccccctcctagtggccccgcttcccctcctccgggc
cgccccaagtcgccccctccgagcaaccccaagatcccccctccctcggcgccgcccacc
gcgccgccgaggtccggccccgcgcccggcaagatctccgtgccggcggccttccagcag
caggagacgtcggcgcctccgccgcgcatccagccgccgcccagcaaggccaaggctagc
gttcctcccccgcccgccgccgccgcgcccacgactcccaccgtcaggatctccgagccc
ccagtcaggcccacgtcgcctccccccgccagcaagcccccgcagcccccagccgccaag
ccgcctcaagccccagccgccaagccagcccccgccaagcccgcccccagcaaacccgcc
ccctcccgctcccccacgccctcgaagggcggggccgaccccatcccggagggcaagtct
caggtcactggccaggtgcgtacgggctggttgtaa
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