Penaeus vannamei (Pacific white shrimp): 113805723
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Entry
113805723 CDS
T06111
Name
(RefSeq) transient receptor potential protein isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvm04040
]
113805723
Ion channels [BR:
pvm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113805723
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
Ank_5
SHOCT
Ank_4
Motif
Other DBs
NCBI-GeneID:
113805723
NCBI-ProteinID:
XP_069973432
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Position
40:complement(14438080..14457872)
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AA seq
1047 aa
AA seq
DB search
MGEGQGSGSQGLSVPTPSPQPPSSPMTMQRIQDDLEDLELDEVEQILTSEEKRFLLYVER
GDVASVRHILKKAKKENKKKAGSFNLNCVDPLGRSGVVVAVENENLDMILLLLDEGVLAE
DALFYAIAEEYVEGVEALLGHEEKIHVAGEAYSWQRKESEKANFTGDITPLILAAHKNNY
EIIKLLLDRGATLPMPHDIRCACDECLISSSEDSLRHSLARINAYRALASPSLICLSSKD
PLITAFSLSDDLDKLATLEYEFRDEYTALRTQVLEFAMRLVDETRSSDELEIILNYDPEG
EPYQKGQFMHLNRLKDAVDNNQKQFVAHASVQQLLGTVWYDGMPGFKRRSLPDQLMAVVK
IGVLFPVYCMSFLLAPKTSFGGSMKKPFIKFIVHSSSYCCFLLLLVIVSLRLESLIIELF
GTTSMVERLHKQERESRGGYPSITELLIVVYVFGFIYGEMKALWNDGLLEYAKDLWNFVD
FGSNFFYMNWIFLRLTALFLTTRAVWAGENPYFPREMWPPFDPMLLSEAMFCAGNILSFL
KLVHIFSVNPHMGPLQIALGRMVVDIIKFFFIYTLVLFAFGCGLNNLLWYYADIDKGKCY
SLPGGLPNPKESQSCEIWRRFSNLFETSQSLFWASFGLVDLINFELTGIKSFTRFWSMLM
FGSYNVINVIVLLNLLIAMMSNSYTFIVDKCDVEWKFARSKFWMSYFEEGQELPSPFNLV
PKLSALCEFRKPNFRESFKKRQDQMRDDQYQTVMKNLVRRYVTAEQRNADETLITEDDVN
EVKQDINSFKYELLNILRINGMMTGNAHHKEDMAVGKKQQARERRLMKGFNIGLVEGIEQ
SMHFGNKKSKNPLLNIVLKQAAKSEKKDWNSIMRQSKKKRDPIGSSSTSLQRQSLRNNKR
CNAAWSKVKFYQKRGVFLGGQIDPRMLREIKNKGQVAPLQSRSQGWRTLQKLHDRGEITQ
ENFDRCVGNTPSPGSTAAPTPIPPTSPTPPLPRVGVYTQSSPCATADDLISAVRGDTLSP
HPTPSPKPSPKASNGTSKPFGTGKGWI
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaggacagggatccggttcgcaagggctctccgtgcccacgccgtctcctcag
cctccttcatctcctatgacgatgcagaggatccaagacgacctggaggatcttgaactg
gacgaggtggaacaaatcctaacctcggaggagaagcggttcctcttgtacgtggaacga
ggagacgtggcttccgtcagacacattttgaagaaagccaagaaggagaacaagaagaag
gctggctccttcaacctgaactgcgtggatcccctggggcgctcgggcgtcgtcgtggcc
gtggagaacgagaacttggacatgatcttgctgctcctggacgaaggcgttctggcggag
gacgcgctgttctacgccatcgccgaggagtacgtggagggcgtcgaggcgctgctgggg
cacgaggagaaaatccacgtcgccggggaagcttattcctggcaaaggaaagagagcgag
aaggccaacttcaccggtgacatcacgcctctgatcctagcggctcacaagaacaattac
gaaatcatcaagctgctcctggaccgcggggcgaccctgccgatgccgcacgacatccgc
tgcgcctgcgacgagtgcctcatctctagctctgaggactcgctcagacactctctggct
cgcatcaacgcctatcgcgccctggcctcgccctcgctcatctgtctctccagcaaagac
cctctgataacggccttctcgctttctgatgatttggataaacttgctacgctggagtac
gagttccgggatgaatacacggctctgaggacacaagtcctagagttcgcaatgaggctc
gtggacgagactagaagttcggacgaactggagatcatactaaactacgacccggaagga
gagccctaccagaaggggcagttcatgcacctgaatcgcctcaaagatgctgtcgacaac
aaccagaagcagttcgttgcccatgccagcgtgcagcagctcctgggcacggtgtggtac
gacggcatgcctggcttcaagcgccgcagcctccctgatcagctgatggccgtggtgaag
atcggcgtcctgttcccggtctattgcatgtccttccttctggccccaaagacatctttc
ggaggctccatgaagaaaccttttattaaattcatcgtccattcgtcttcttactgctgc
ttcctgctcctgttggtgatcgtttccctgcgcttggagtcgctcatcatcgaactgttc
ggaaccacatcgatggtcgagcgcctccacaagcaggagcgggaatcgcggggcggttac
ccttctatcaccgaactgctcatcgtcgtgtacgtcttcgggttcatctacggggagatg
aaggcgctctggaacgacggcctcctcgaatacgccaaagacttgtggaatttcgtcgac
ttcggaagtaacttcttctacatgaactggattttcttaagactcacggctttgtttctg
acgacgcgggcggtgtgggcgggagagaacccgtacttcccgagggagatgtggcctccg
ttcgaccccatgctgctctccgaggccatgttttgtgctggcaatattcttagcttcttg
aagttggtgcacatcttcagcgtcaaccctcacatgggccccctgcagatcgcgctcggc
agaatggtggtcgacatcattaagttcttcttcatctacacacttgtgctctttgcattc
ggatgcggcctgaacaatcttctttggtattacgccgacatagataaaggcaaatgttat
tcattgcctggtggattacccaatcctaaagaatcacagtcatgcgagatctggcgaaga
ttttctaacctcttcgagacttcacaatcgcttttctgggcttccttcgggctggtggac
ttgatcaacttcgaactgactggaattaagtctttcacgcggttctggagtatgctcatg
ttcggctcctacaacgtcatcaatgtcatcgttctgctaaacctcctcatcgccatgatg
tccaactcttacacgttcattgtggacaagtgtgacgtggagtggaaattcgctcgctcg
aagttttggatgagttacttcgaggaaggccaggaactgccttcgcccttcaacctggtc
ccgaagctgtccgccctgtgcgaattccggaagcccaatttcagggagtccttcaagaag
cgccaggaccagatgcgggacgaccagtatcagacggtgatgaagaacctcgttagacgc
tacgtcacggctgaacaacgtaacgcggacgagacgctcatcacggaagacgacgtcaat
gaagtaaagcaggatatcaactccttcaagtacgagctcttgaatatcctcagaatcaat
ggcatgatgactggcaatgcacatcacaaggaggacatggctgtgggcaagaaacagcag
gcacgagagcgacggctcatgaaaggtttcaacatcggcctggtggagggcatcgagcag
agcatgcacttcgggaacaagaagagcaagaatcccctgcttaacatcgtgctaaagcag
gcggcgaagtcagagaagaaggactggaactcgataatgcgccagagcaagaagaagcgc
gacccaatcggctccagcagcaccagcctccagcgacagagtctcaggaacaacaagcgc
tgcaacgcggcctggagcaaggtcaagttctaccagaaacgaggcgtcttccttggaggg
caaattgaccccagaatgctgagagagatcaagaacaagggacaggtggccccgctgcag
agccgttcccaaggatggcgaactcttcagaaattgcacgatcgtggggaaattacacag
gaaaatttcgacaggtgtgtaggaaacacaccaagtcctggaagtactgcagctcctact
ccgattcctccaacatcaccgacgcctcctctacctagagtcggggtttacacgcagtca
tcgccctgtgctacagccgatgacctcatatccgcagtcagaggagacactctgtcaccg
cacccgactccttcgccgaagccttcgccgaaggcgtcaaatggaacctcgaagcccttt
ggaacgggcaaggggtggatctga
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