Penaeus vannamei (Pacific white shrimp): 113807876
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Entry
113807876 CDS
T06111
Name
(RefSeq) X-ray repair cross-complementing protein 6-like
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
113807876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvm03041
]
113807876
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113807876
Spliceosome [BR:
pvm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113807876
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
113807876
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_C
SAP
HeH
SDE2_2C
Ish1
Motif
Other DBs
NCBI-GeneID:
113807876
NCBI-ProteinID:
XP_027214980
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MSEWRFDLDDDQEEDGDEQGEGSWTFGGRAASIFLIDASKEMCETSGDDGEDEESSFKKA
IRCAHATMMRKIISSDQDLSAVVLYNTKESKNNIDVPSIYILQELERPGAEKILQLEELI
EMSDSKFEREYGHSNDTNIHEALWVCQSIFNKCKSKLAGQSIMLFTCQDDPHSGNNQKQK
QARQKGKDLNEAGISLELLHMGTSFDVNKFYKDLIIPDDGEDEESQEKETLADPASRFEE
LMDRVKRLEHKQRTTGRVTFTLAPGVEMALGVYTTVRKMNKPYKVKLWKNTNEEVRYMKK
EYLEETGELLMPSDYVKYQVYGGKKIKFSLDELRSMNQVYEQGIELLGFKSIESIKPYYH
IKPANFLYPDEKSVQGSNKVFAALLDRCLARKVAPIVRMVARRGSSVSWAALIPQKEELD
EKNCQISPPGFYACHLPFADDFRNIEIEDVTRASVDQVDAAKDVVKKLHFKYSPENFDNP
DIQTHWRNIEALALNRSNLEELVDYTVPDGERIRKKAGSLIESFREMVYPPSYDPNAAPK
KRPAASGTSSAPKRAKPDPASVDVEQMAKAGKADKLTVDVLKSWLQDRGIKVTGKKKAQL
VQDVVDEVGS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtggcgattcgatctcgatgatgaccaggaggaggacggagatgagcagggg
gagggatcctggacatttggggggcgagcggctagcatctttctgattgatgcgagtaag
gagatgtgtgaaacctctggcgatgatggagaggatgaagagtcctccttcaagaaagct
atcaggtgtgctcatgcaacaatgatgagaaagatcatctcaagtgaccaagacctcagt
gctgtggtgctctacaacacgaaggaatcaaagaacaacattgacgtcccaagtatttac
attttgcaagaacttgagcgtccaggagcagagaaaatcctgcagcttgaagaactcatt
gaaatgagtgatagtaagtttgaaagggagtacggacacagcaacgataccaatatccat
gaagctctttgggtgtgtcagagtatcttcaacaagtgcaaaagcaaactcgccgggcag
agcatcatgctgttcacctgccaagacgaccctcatagcggcaataaccagaagcagaaa
caggctcgtcagaagggcaaggacctgaacgaagctggcatttccttggagctcttgcac
atgggaacgagctttgatgtcaacaagttctacaaggatcttatcatcccagacgacggt
gaagatgaagagtcgcaagaaaaagaaaccctcgcagatcctgctagtcgcttcgaggag
ctgatggacagagtgaagcggctggaacacaagcaacgcaccacgggaagagtcaccttc
accttggcacctggagttgaaatggctcttggagtgtacaccactgtcaggaaaatgaac
aaaccatataaagtgaagttatggaaaaacaccaatgaagaagtaagatatatgaagaaa
gaatacttagaggagactggtgagctgttgatgccatcagattatgtgaaataccaagtg
tatggagggaagaaaatcaaattttctttggatgaattgcgtagtatgaaccaggtgtat
gaacaaggaattgaacttcttggattcaagtcaattgaaagtattaaaccttattatcac
atcaagccagcaaattttttgtatccagatgagaaatctgttcaaggaagcaacaaggtg
tttgctgctttgctggaccgttgtttggctcgtaaagtggcccccatagtgcgcatggtg
gctcgcaggggatcctcggtctcgtgggcagccctcatcccgcagaaggaagagctggat
gagaagaactgccagatcagtcctcctggattttatgcctgccacctcccctttgctgat
gatttccgcaacatcgaaattgaagatgtcacacgagcttcagtagaccaggttgatgca
gccaaggatgtggtgaagaaactccacttcaagtactctccagagaactttgacaatcct
gacatacagacacactggcggaacatcgaagctctggcattgaacagatccaatctggaa
gagttggtggattatactgtgccagatggtgagcgaatacggaagaaggcaggcagcctg
atcgagagctttagggagatggtctatcctccatcttatgatccgaatgcagcccccaag
aagcgtccggcagccagtggtacatcatcggcacccaagagagcaaagccagatccagcg
agtgtggatgtcgagcagatggccaaggctggaaaggcggacaagctaactgtcgacgtc
ttgaaaagctggctgcaggaccgaggtataaaggtcacaggcaagaaaaaggcccagctt
gtgcaagatgtggtggatgaagtcggctcataa
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