Penaeus vannamei (Pacific white shrimp): 113808376
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Entry
113808376 CDS
T06111
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvm03036
]
113808376
Chromosome and associated proteins [BR:
pvm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
113808376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
113808376
NCBI-ProteinID:
XP_027215588
LinkDB
All DBs
Position
Unknown
AA seq
2174 aa
AA seq
DB search
MNGEPNTNPQVPVTTLAGIASLTELLPELPLPSSSVGPGDSRSLLFHPRVAEEAQRLLSC
QDPALVEQLANSLALTHADHIELKEQYAGTDSSILLRNAPPLLEGILRVNPAVFTARQGG
SEGGAVIKTECGKGISSVNHSSPSKHINNVSVIQCGPVLANATQVKVKTEPGGPSPPASL
PLTKPDGQLEKHHGHKLANKQDPQTDESYGKRNLVPKSDRQSDKSVDKDEDKSSEKHSKR
SDKTSNKGTKSESRSAHVTPEKEKASPNHTQDNKNKGVDKMRTLSNGTQSMSRMHHKSHK
SSRESNDNAIVAAKAMKEPVVVLNKLSSEELKSMGRIPKLSGVGSNKPEKTPDTPRNSSR
SSRGQRDAKKYREVSSDSESSEEDKKKPNKYFKNREREREEKKKKDKADRKRNRVQSDEE
DYNPDQESKRRRKGAHDSSEDEDSEYEEEGSKAPKRAAPAPLQKKPSYTNKRLERKLVPQ
TEKLTTEELMETGVYQRFNRAVEKIFDNTEDLDLSAEIEEDGDVPQEYLIPKYELSDLCS
EAAKLKSLGAMAIVPPERLVRLLNILEKNIRDGAKVTPIVDEEDEDDDKLWMELVMERIL
RGMDASLTAMNILTSPNMSKRVYLEDVIERCVQFTKFQLSNTIYPSFDPVYRVDSKKDGY
VGTVKRKRTQCKDVRNRSIIGLYNKLHEVVGLLADLLSIQTLTDTTVLQLSTLGVAPFFV
ENVSELQLSALRLVTKVFSKYNKHRRLLLDDILASIARLPNSKRSLRTYRLNSDENIQML
TALVLQLIQCVVELPEELAQDNKNKSASDGDTQNSKDSKDSKVEEKKPELNMDRDVLVCN
RYETAMTTAYSFLSVFLQKTGSKNEEIDYRPLFENFVQDLLATVNKPEWPAAELLLSLLG
KLLVQKFSNKNTDMALRVSSLDCLGVVAAKLRRDAVSSQLELENIKSIIQEVREEENRDA
PMLEDGSPPTENGTTGPSTPSSKKSKKKKSSSEKAKEAEVQSDEEEERTMFLQRVLLDWL
AVNSGSETALLHARHFFIGQWYREAYTEIMRQKQGPLPQSNTRKGASHNKKKRKRKGDES
EEESTGESDDDDDDDDVKKGQVDEALVAEVTQLAERRKLFLLTKVPAFPPASPGAKTQTL
QTHIGYENAELITRYLASKRPFSQSFDMYLKQILRVLTESAIAVRTKAMKCLTMVVEADP
GVLSRNDMQMGVHHSFLDHSTSVREAAVDLVGKFVLSRPEVLNTYYNMIAARILDTGVSV
RKRVIKILKDICLECPDFNKIPEICVKMIRRVNDEEGIKKLVQEVFQNMWFTPVRERPQL
DEESLLRKVNNITEVVIACKDTGLDWFEQLLHSMFRPKEDKDDVTKVNTEPPKSLVTACK
QIVDCLVRHILVLEEGDLENQPADQPRTTSQRLLACHQTLYLFAKIRPQLLVDHAITLQP
YLAWRCRTQVDYTMIGVVARTLELVVPLMEHPSETFLSQLEEDAVKLILQHDRTVITSCL
ALLGSIVNTVTKNYRLIKDCFNRYHSFISDYKRLNEENPDNPRLENYKPFFRRALYTIGL
LLKHFDLKNQVVRCGLPDNITEQVFETLMYFMGLPDINLQYCTLQAVGFVCIRHYELMMG
SRLKQLYHMMLLDPSVNTKLRIQTLQNVETYLQEEEIRMIKQDQEWAKQKTRENLKEMCD
VQSGMASAIIQMYLKEVLECVVAGSVVVRHSALRVIQLVLAQGLVHPVQIVPYLVCMSTD
TEEIIAHSADKQLQDIEKKYPGFIGMKAMQGFRLSYRLQSLIQPAMPTRGFRTKEGEIPG
ALNGFLYSIMRTTKQHRRAVAFSLLKQFEEQARTSLTELLFIADNLAYFPYQVLDEPLFI
IHHIDIMISVTGSNLLQNFREALLPPPNAEMKINPETRQPEYVDDLDDEEDVEVYLSRLP
PCLTPLVECINASQGCLLLLMLKEHLKEIYGITDGKISQYSPSDTSKQYEKGASRKSASK
FNPKAILKRLKEEPVSDVDMVDDTRQKVDLITQYLDFKALMLKIDPDDDDDEDSDTDMAK
KSFQNDGSTPLPNTRSLRTNQNPSDVPLLPGTHDGWKDQPKDAEATAETLTAPDCNVVET
KTEEQPATRRTPIKPITIRASQVTPTREHRSHHHHHRSSHRSSSHKKHKKKKKRKKASDS
EEEESEFSDPDFLV
NT seq
6525 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggagccgaacaccaacccgcaagtgcccgtcacgaccctagcgggcatcgcc
agcctcaccgagttacttcctgaattgccactaccatcgtcatctgtgggtccaggagat
tctcgatcgctcctgtttcatccccgtgtggccgaggaggcacagcgtcttctttcctgc
caggatccagctctagttgagcagctggcaaattctctggcattgacacatgcagaccac
atagaactaaaggagcagtatgctgggacagattcttccattcttctgagaaatgcacct
ccattgttagaaggaattcttcgtgtgaatcctgctgtttttacagctagacaaggtggt
agtgaaggaggagctgttattaaaaccgagtgtgggaagggcatcagttcagtcaaccat
agttccccctcaaagcacataaacaatgtgtctgtgatccagtgtggaccagttcttgct
aatgctacccaggtcaaggtcaagaccgagcctggaggtccttcacctcctgcatccctg
cctctaaccaaacctgatgggcagttagagaagcaccacggtcataagttggccaataag
caagatccacaaactgatgagtcttatggcaagagaaatcttgtccccaaatctgacaga
caatctgataaatctgtggacaaagacgaagataagtcctcagagaagcatagtaaacgg
agtgataagactagtaacaaaggaacaaaatctgagagcagatcagcccatgttacccca
gaaaaagaaaaagcttccccaaaccacacacaagacaataaaaacaaaggtgtggacaaa
atgcgaacgttgagcaatgggacacagtcgatgtctcgtatgcatcataaatcacacaag
tcttctagagaatctaatgacaatgccattgtagcagctaaagctatgaaagaaccggtg
gtggtcctcaataagctctcttcggaggagcttaaatcaatgggccgcattccaaagctt
tcaggggtagggtccaataaaccagagaaaacccctgatacacctagaaatagttcaaga
agttctcgaggacaaagagatgctaagaaatacagggaagtcagctctgattctgaatcc
tcagaagaagacaagaagaagccaaataaatactttaagaatcgggaaagagagcgtgag
gagaagaagaagaaagataaagcagataggaaaagaaaccgtgtacagtctgacgaggaa
gactataatcctgatcaagaaagtaaaagaaggagaaagggtgctcatgattcttcagaa
gatgaggactctgaatatgaagaagaaggttcaaaggcccccaagagagctgctccagca
cctctgcaaaagaaaccatcatacaccaacaaacgtttggagagaaagttggtgccacaa
actgagaaactcacaactgaagagttgatggaaactggtgtttaccagagatttaacaga
gctgttgaaaagatatttgataacactgaagatcttgatctcagtgcagaaattgaggaa
gatggtgatgttccacaggagtatctcattccaaaatatgagctgtcagacttatgttct
gaagctgcaaagttaaagagtttaggagctatggccatagtaccacctgaaaggcttgtc
agacttctcaatatcctggaaaagaacatccgagatggagccaaagtgacccccatagtg
gatgaggaggatgaagatgatgacaagctatggatggagttggtgatggaacgaatcttg
cgtgggatggatgcctctctcacggccatgaacatattaacgtcaccaaacatgagcaag
agagtgtaccttgaggatgtcattgaaagatgtgtccagtttaccaaattccaactctcc
aacaccatttatccatcctttgatcctgtttacagggtggatagcaaaaaagatggttat
gttggcactgtaaaaagaaagagaacccagtgtaaagatgtgaggaaccggagtatcatt
ggtctctacaataagttgcatgaggtggtaggtctgttagctgacctattaagcatccag
acactaactgacacaacagtgttgcagctgtctacccttggtgttgctccattctttgtg
gaaaatgtttcagaacttcagctctctgcactcagactggttaccaaggtattctccaag
tacaacaagcatcgtcgtctattattagatgacattcttgcttctatagcccgcttaccc
aatagtaaaaggagcttgagaacatacagattgaactctgatgaaaatattcagatgtta
acagccttagttttacagttgatacagtgtgtagttgaactcccagaggagctggcacaa
gacaacaaaaataaaagtgctagtgatggtgatacacagaattccaaagattccaaagat
tcaaaagtggaagaaaagaaacccgagttaaacatggatagagatgtattagtgtgtaat
cgttacgagactgccatgactacagcatatagttttctatcagtgttccttcaaaaaacg
ggcagcaaaaatgaggagattgattatcgacctctatttgaaaattttgttcaagatctc
cttgccacagtgaacaagcctgaatggccagctgcagaactacttttgtcactcttaggc
aaacttctagtacaaaaattcagcaacaaaaacacagacatggcccttagggtatcatct
cttgactgtttgggggtagtagcagcaaagttacgacgtgatgctgtgtcttcccaattg
gaacttgaaaatattaaaagtataatccaagaagtcagggaggaagaaaatcgtgatgcc
cccatgcttgaagatggctctccacctactgaaaatggcaccacagggccatctacacca
tccagtaagaagagcaaaaagaagaagagtagtagtgaaaaggccaaagaagctgaggtt
caatcagatgaagaagaagagaggaccatgttcttgcaaagagtcctcttggactggctt
gctgtaaactcaggaagtgaaacagcactcttgcacgctcgtcatttcttcatcgggcag
tggtatagggaagcttacacagagattatgcgtcaaaagcaaggcccattaccacagtca
aatactcgaaaaggagctagccacaacaaaaagaaaagaaagagaaaaggagatgaaagt
gaagaagagagcacaggagaatctgatgatgatgatgatgacgacgacgttaagaagggc
caggttgatgaagctcttgttgctgaggtcacacagttagcagagaggcggaaactcttc
cttcttacaaaggtcccagccttcccacctgcctcgccaggagcaaaaacacagacactt
cagacccatattggctatgaaaatgctgagctcattactagatatttagcctctaagaga
ccattctctcagagttttgatatgtatctgaaacagattttgagagtattaacagagtca
gccattgcggtgcgcacgaaggctatgaagtgcctgactatggtggtagaagctgatcca
ggagttctgtcgaggaatgatatgcagatgggtgtgcatcattcgttcctagaccactcc
acctctgtaagagaagcagctgttgacttggttggaaaatttgtcctatcacgcccagaa
gtcttgaacacgtattataatatgattgctgctagaattttggacacgggtgttagtgta
agaaaaagagtcatcaagattttaaaggatatctgtttagagtgtccagacttcaacaaa
attccagagatttgtgtaaaaatgatccgaagagtcaatgacgaggagggtatcaaaaaa
ctggttcaggaggtcttccagaacatgtggttcacacctgtgcgagagagaccacaatta
gatgaagagtcattattgagaaaagtaaacaatatcacggaagtggttatagcctgcaaa
gatactggcttggattggtttgaacagcttttgcacagtatgtttcgcccaaaggaagac
aaagatgatgttacaaaggtcaatacagaacccccaaagtcattagtaacagcttgcaag
cagattgtagactgtttggtgagacatatcttggtgctggaagagggagacctggagaac
cagcctgcagatcagccaagaaccacatcacagcgtcttttggcatgtcaccagacactc
tacctctttgctaaaatccgtccccaacttttggtggaccatgctattacactacaacca
tatttggcatggaggtgtcggacgcaagtggattacacaatgattggtgtggtggctcga
actttagaattggttgtgcctttgatggagcaccctagtgagactttcttgtctcagcta
gaagaggatgcggtcaaattgatcttacaacacgatcgcaccgttataacctcgtgcttg
gctcttctaggttctatagtcaacactgtcactaaaaactatagattgatcaaagattgc
tttaacaggtatcacagctttatttctgactacaaaaggctgaatgaggaaaacccagat
aatcctcgactagagaattacaagcccttcttcagaagagctctctataccattggcctc
ctgctgaaacactttgacctcaagaaccaagtagtgagatgtgggctgccggataatatc
accgagcaagtatttgagaccttgatgtacttcatgggtttgccagatataaacttacaa
tactgcacccttcaagcagtagggtttgtttgcatacgccactatgaattgatgatgggg
tctcgcctaaagcagctgtatcatatgatgttactcgacccgtccgttaacaccaagctg
cgcatccagaccctacaaaatgtggagacttatctccaggaggaagaaatcaggatgatc
aagcaggatcaagagtgggcaaaacagaaaactcgtgaaaatttgaaagaaatgtgtgat
gttcagtctggtatggcatcagcaatcatccaaatgtatctaaaagaggttttagagtgt
gttgtagctggcagtgtggttgtccgccactcagcactacgagtgattcaactggtgtta
gcacaaggtcttgtccaccccgtccagattgtaccttacttggtctgcatgtctacagac
acagaggaaatcatagcacattcagcagataagcagctgcaggacatagagaagaaatac
ccaggctttatcgggatgaaagctatgcaaggtttccgactgtcttacaggttgcagtca
ttgatacaaccagcaatgcctacacgtggatttcggaccaaggaaggggaaatccctgga
gctcttaatggtttcttatattctattatgcgtacgaccaagcaacacagaagagcagtg
gccttttccttactaaagcagtttgaagagcaggcacggaccagtttgactgaactgttg
tttatagctgacaatctagcatactttccctatcaggtgctagatgaaccattattcatt
atacaccatatagatataatgatctctgtcacgggtagtaatctgctccagaacttcagg
gaggccctcctccctcctccaaatgcagagatgaaaataaacccagaaacgagacagcca
gagtatgtagatgacttggatgatgaggaggatgtagaagtgtatttatcccgcctccca
ccttgcctcactccacttgtggaatgtatcaatgcctctcagggatgcctcctgttgctc
atgttgaaggagcatttaaaggagatctatggcattacagatgggaaaatttcacagtat
tcaccctctgacacatcgaagcaatatgaaaagggggcttctagaaaaagtgcgtcgaag
tttaaccccaaagctattctaaaacgattaaaggaagaacctgtgagtgatgttgacatg
gtagatgatactcggcagaaggttgacctcatcacgcagtaccttgatttcaaggcactc
atgttgaagattgatcctgatgatgatgatgatgaagattctgatactgatatggcaaag
aaatcattccagaatgatggcagtacaccactgccaaatacaagatcgttaagaacaaac
cagaatcctagtgacgttcccttgctgcctggtacacacgacggatggaaggatcagccc
aaggatgcagaagcaacagcagaaaccctcacagcaccagattgcaatgtagtagaaacc
aaaacagaagagcagcctgcaacacgtcgcacaccaatcaagcctataacgatccgtgcg
tcccaagttactcccacaagggaacatcgttctcaccaccaccaccacagatcttctcat
cgttcttccagccacaaaaagcacaaaaagaagaaaaaacggaagaaggccagtgactct
gaggaagaggaaagtgaatttagtgatccagatttcctagtatag
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integrated database retrieval system
