Penaeus vannamei (Pacific white shrimp): 113812981
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Entry
113812981 CDS
T06111
Name
(RefSeq) CXXC-type zinc finger protein 1
KO
K14960
COMPASS component SPP1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvm03000
]
113812981
03036 Chromosome and associated proteins [BR:
pvm03036
]
113812981
Transcription factors [BR:
pvm03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
113812981
Chromosome and associated proteins [BR:
pvm03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
113812981
COMPASS/SET1 complex (yeast)
113812981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
113812981
NCBI-ProteinID:
XP_069987647
LinkDB
All DBs
Position
2:24678022..24689888
Genome browser
AA seq
721 aa
AA seq
DB search
MSKSDIARQFDLPERQSKLNTMLREEGLKDEQVYCVCRTSDVSRFMIGCDKCEEWYHGDC
INVTESEANKIKKFFCEKCRLKEPSLEIKYKQKKTHHHHHHDDNKYHRDKERKDKERKDR
EKKDKERKDLERRDKDKHKHDKHSAPKSKSSSTKNSSSHRCGACEACYQREDCGRCENCK
DMPKFGGPHKLRQKCKKRQCHNFVQLAQKPNKNSSSTSSKKHRDYEKEKLTKPPQTLPAI
TAESGDDYMTVLKDKNELSDDDLWEPGKKQGKESSHSDRKTKDKEPTPHSRKRKEQINVS
RNKRRRHEPDSSDSDSDAGWLKGEAAAVRQCFGPQCVKAARPNSKYCSDECGLKLAEARI
YSVLPQRIQEWKMMECVAETRDIRQLEKIRKQQLEAREVLQQLDQRHLDIDKLLERGKNE
KIDPNADDGGDDDSGDSAFIYCVTCGHEVPARRAIRHLENCFNKLESQTTFGSMYKTRIE
GNNMFCDFYNPSSLTYCKRLRVMCPEHTKAPLVSDVEVCGAPLTKNVFQETGEICLAPKK
KCLKHYCWEKMRRAEIDMERVRQWLKLDELLEQERLVRQAMTNRAGVLGLMLHSTYDHAL
AEKLQQSQQYHQNDHQYHSGHKYQRSTSTASQSTKSTPHNKSSSATNHKTSQQHRPVTSQ
QYKAGDHHYQNDTLHNDHQYHNSERKHQHTDHQYHSSRERKYHDDHRYHSDHQYYSIKKQ
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaatcagacattgcaaggcaatttgacctgcctgagagacaaagtaaactgaac
accatgttgcgggaagaaggcctgaaagatgaacaagtttactgtgtgtgccgcacatct
gatgtgtcgcgattcatgattggctgtgacaaatgtgaggagtggtaccatggtgactgt
atcaacgttacagagagtgaagccaacaaaattaagaaatttttttgtgaaaagtgtagg
ctgaaagaaccttctcttgagattaagtacaagcagaagaagactcaccaccaccatcat
catgatgacaataaatatcatagagataaggagaggaaagacaaagaaagaaaggacaga
gaaaagaaagataaggagagaaaggacctggaaagacgagataaagataagcataaacat
gacaaacactctgccccaaagagtaaaagcagcagtactaagaacagcagtagtcaccgt
tgtggtgcttgtgaggcctgctaccagagggaagattgtggacgctgtgaaaattgtaag
gacatgcccaaatttggagggccacataaacttcgtcaaaagtgtaaaaagagacagtgt
cataattttgttcagcttgctcagaagccaaataaaaacagtagtagcacaagtagtaag
aaacacagagattatgaaaaggagaagttaacgaagccaccacaaacattgccagcaatt
actgcagagtctggtgatgattatatgactgttttaaaagataagaatgagttgagtgat
gatgacttatgggaaccaggaaagaagcaaggaaaagagtcttcacacagcgataggaag
actaaagacaaggaacctactccacatagtcgtaagagaaaagaacagattaatgtaagc
agaaataagagaagacgccatgaaccagattcatcagattcagactcagatgcaggttgg
ctcaagggagaagcggctgcagtgaggcagtgctttggtcctcagtgtgtaaaagcagca
cggccaaacagcaagtactgtagtgatgagtgtggcctaaaattagcagaagcaaggatt
tattcagtattaccacaacgtattcaagagtggaagatgatggagtgtgtagctgaaacc
cgcgatatcaggcaacttgaaaagatcagaaagcagcagttggaggctcgggaagtactt
cagcagcttgatcagagacatttggatattgacaaattgcttgagcgaggaaaaaatgaa
aagattgaccctaatgcagatgatggcggtgatgatgatagtggagacagtgcttttatt
tattgtgtcacctgtggccatgaagtacctgccagaagagcaatacgtcacttggaaaac
tgcttcaacaaattggagagtcaaacaacatttggatctatgtacaagactcgcattgaa
ggcaacaacatgttttgtgacttctataaccccagtagccttacctattgtaaaagattg
cgtgtgatgtgtcctgaacatactaaagctcccttagtgtctgatgtagaggtatgtgga
gcaccacttacaaaaaacgtttttcaagaaactggagagatctgtttagcaccaaaaaag
aaatgcctaaaacactattgctgggagaaaatgcgaagagctgagatagatatggagaga
gtgagacagtggctgaaacttgatgaacttttggagcaagagcgtcttgtgcgtcaagcc
atgacgaatcgcgcaggagtccttggtctcatgctgcactcgacatatgaccatgcattg
gctgagaaacttcagcagtcacaacagtatcatcagaatgaccatcagtatcattctggt
cataagtaccagcgtagcaccagcactgccagccaaagtacgaaatcaaccccgcataat
aagtcatccagtgcaactaatcacaagacatcccagcaacatcggcctgttacttctcaa
cagtataaagcaggtgaccaccactatcagaatgatacccttcacaatgaccatcagtac
cataatagtgaacgtaagcaccaacacacggaccaccagtaccattctagccgggagagg
aaataccatgatgatcatcgttatcacagtgatcatcaatattattctattaaaaagcaa
aagtag
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