Penaeus vannamei (Pacific white shrimp): 113817209
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Entry
113817209 CDS
T06111
Symbol
Ufd1
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113817209 (Ufd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvm03009
]
113817209 (Ufd1)
Ribosome biogenesis [BR:
pvm03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
113817209 (Ufd1)
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
113817209
NCBI-ProteinID:
XP_069993385
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All DBs
Position
23:36455349..36461506
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AA seq
344 aa
AA seq
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MNYRACVDLSSDLSSSEHPVQAQLIKPPWMTFARVMKTWIYKFSFNMFGEPLQPRPFNTQ
YRCYSVSMFPGADKQSVENGGKIIMPPSALDVLTRLNIVYPMLFKLTNRRANRNTHCGVL
EFVADEGKVYIPYWMMRNLLLDEGDLIHIESVSLPVATFSKFEPQNVEFLDITNPKAVLE
NALRNFACLTTDDVIAINYNDRIYEMRVLEVKPGSAVSIIECDMNVEFAAPVGYQEPERM
DSAAALPEDTEEEMLPEPTGFYSFQGSGNRLDGKKKNLQLPQEELLKKLPRQRGIPDYDY
EIGFIKFWRKLPKVNNTENKPEEPDEFESFAGEGTSLRQAKSRK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaattatagagcttgtgtagacctctctagtgatttatcgtcaagtgagcatccagtc
caagctcaacttatcaaaccaccatggatgacatttgcaagagtaatgaagacatggata
tacaagttttccttcaatatgtttggggagcctttgcagccccgtcctttcaacacccaa
taccgatgctattcggtatccatgttccctggcgctgacaaacaatcagttgaaaatggc
ggcaaaattataatgccaccttcagctctggatgttttgacacgtcttaacattgtttac
ccaatgttattcaagttaaccaaccgacgtgccaatagaaatacacattgcggtgtttta
gaatttgtagctgatgaaggaaaggtttatattccttattggatgatgagaaatctgctg
ctggatgagggggatcttattcacatcgagtctgtgtcactccctgttgctacgttctcc
aagttcgaacctcagaatgtggagttccttgatatcactaatcccaaagctgttttggaa
aatgcgcttcgaaactttgcttgtctaacaactgacgatgttattgccattaattacaat
gatagaatatatgaaatgcgagtcctagaggtcaagcctgggagtgctgttagcatcatt
gaatgtgatatgaatgtggagtttgctgccccagtgggctaccaggagccagagagaatg
gacagtgctgcagccttaccagaggatacagaagaggagatgctaccagaacccacaggc
ttctactctttccaaggctcaggaaacagactagatgggaaaaagaagaatttgcaactt
cctcaagaagaacttcttaaaaaattgccccgtcagcgtgggattccagattatgattat
gaaataggttttattaaattctggagaaagttaccgaaagtgaacaatactgaaaataaa
ccagaagagcctgatgaatttgaatcttttgctggagagggtacatctctgcgacaagca
aagtctagaaagtaa
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