Paenibacillus vortex: PVOR_14459
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Entry
PVOR_14459 CDS
T05385
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pvo
Paenibacillus vortex
Pathway
pvo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PVOR_14459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvo03400
]
PVOR_14459
Enzymes [BR:
pvo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PVOR_14459
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PVOR_14459
DNA repair and recombination proteins [BR:
pvo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PVOR_14459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
HscB_4_cys
OrfB_Zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
EFU41563
UniProt:
A0A2R9SW42
LinkDB
All DBs
Position
238558..239376
AA seq
272 aa
AA seq
DB search
MPELPEMENYRRLLSQSIVNVPITNVVVNREKSLNVPVDEFTSVLKGSKVIFVERRGKHL
VFHLHNGGRLLLHLMLGGILYLGRIDEERPPRSTQVEITFGDQVLYFIGLRLGYLHFLTA
KEADDALKELGPELLDRRMTKARFVQLIGKRRGALKTTLVNQQVVAGIGNCYADEIAFDA
RIHPLTKIQDLSEQSLEQLYDSTVKVMNEATDGGGYMEMPFQEGDQLTGAYNDECKVYDR
EGEPCVRCGTAIAKAEHTSRKVFFCPHCQHEA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccggaaatggagaactaccgaagactgttatctcagagcattgtcaat
gtacccatcacaaatgttgtcgtgaaccgtgagaaatcactaaacgtgcctgttgatgag
tttacttccgtattaaaaggaagcaaggtcatttttgtggaacggagagggaagcacctc
gtatttcatctccacaacggaggccggctgctgcttcacttgatgctgggaggcattctg
tatttagggcgtatcgatgaagagcgtcctccccgttctactcaagtcgagatcacgttt
ggtgatcaggtgttgtattttatcggtctgcgcctgggttatttgcattttcttacggca
aaagaagccgatgatgcgctaaaagagcttggacctgagctgctggaccgacgcatgacc
aaagcgcgctttgtccaattgatcggaaagcggcgtggcgcattaaaaactacgctggtc
aatcaacaggttgtcgctggaatcggtaactgttacgcagatgagatcgcatttgatgcc
agaattcatccattgaccaaaatccaggatttgtcggagcagtctttggagcagctgtat
gacagcaccgttaaggtaatgaatgaagcgactgatggcggaggttacatggagatgccg
tttcaggaaggggaccagctgacaggagcctataacgatgaatgcaaggtgtatgatcgc
gaaggagagccttgcgttcgctgcggtaccgctattgcgaaggcggagcatacctcgcgc
aaagttttcttttgtccccattgccagcatgaagcctaa
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