Pseudomonas veronii: PverR02_01365
Help
Entry
PverR02_01365 CDS
T04853
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pvr
Pseudomonas veronii
Pathway
pvr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PverR02_01365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvr03019
]
PverR02_01365
03400 DNA repair and recombination proteins [BR:
pvr03400
]
PverR02_01365
Enzymes [BR:
pvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PverR02_01365
Messenger RNA biogenesis [BR:
pvr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PverR02_01365
DNA repair and recombination proteins [BR:
pvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PverR02_01365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AQY63744
LinkDB
All DBs
Position
301121..303058
Genome browser
AA seq
645 aa
AA seq
DB search
MHDTLQQVFGYPQFRLGQEAAVSAVLAGRSAAAIFPTGSGKSLCYQLSAVLLPHLTLVVS
PLLALMQDQLGFLQRHGISAGSIDSAQSRDEANEVMARARSGELKILMISVERLKNERFR
NFLQSVPISLLVVDEAHCISEWGHNFRPDYLKLPDYQRQFNIPQALLLTATATPKVIADM
QAKFAIAPDDVITTGFYRPNLNLLVEPVSGADKRRRLVQWMNERPGQPSIVYVTLQKTAE
QIAEHLNRHGIQAEAYHAGLPHDKREGIQQRFMGGRSNCIVATIAFGMGIDKSDIRNVVH
FDLPKSIENYSQEIGRAGRDGQPSDCLVLANRDSLNVLENFVYGDTPEQEGIRRVLDELQ
AARGDGQWEFLLRSLSDHSNIRELPLKTLLVQLELKGVIAPRYAFYAEYRFKYLIEPDAL
LARFSGERQAFVAAIVQVCKRAKTWATVDFDTLYQQHQAERNRVVKALDYFQEQGLIELE
SKQMTEVYSLLNTDFDPQVLSAELYTGFKQHEVTEVARIHAMLDLFATEHCLGQRLARYF
GDEHAPQRCGHCSVCHGHVAHLPAPPSLAPLVDKNFMGLCGDFIHRHHEYCGQLPGAERL
TRFLGGISVPLFTKLKARGIPGFAALEDYPYAEVREWAETHLNNL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacaccctccagcaggtctttggttatccacaatttcgtttgggccaggaagcc
gcggtcagcgccgtgctggccggtcgctcggcggcagcgatttttccgaccgggtcgggc
aagtccctgtgttaccagctgtcggcggtgttgctaccgcacctgacgctggtggtgtcg
ccgttgctggcgctgatgcaggaccagttgggtttcctgcaacgccatggcatctcggcc
ggcagtatcgattcggcgcaaagccgcgatgaggccaatgaggtgatggcgcgcgcgcgc
tcgggcgagttgaaaatcctgatgatttccgtggagcgcttgaagaacgagcgctttcgc
aacttcctgcagagcgtgcccatttcattgctggtggtggatgaggcgcactgtatttcc
gaatggggccacaacttccgtccggattatttgaagctgccggactaccagcgtcagttc
aatatcccacaagcgctgctgctgacggctacagcgacgcccaaggtgattgccgacatg
caggccaagttcgccattgcacctgacgacgtgatcaccacgggcttctaccggccgaac
ctcaacctgttggtagaaccggtgagcggcgcggacaagcgtcgtcggctggtccaatgg
atgaacgagcggcccggccagccgagcatcgtctacgttaccttgcagaaaaccgccgag
cagatcgccgagcacctgaatcgccatggcatccaggccgaggcgtatcacgccggcttg
ccccacgacaaacgcgagggcatccagcagcgtttcatgggtgggcgctccaattgcatc
gtcgccaccatcgcgtttggcatgggcatcgacaagagcgatatccgcaacgtggtgcat
ttcgacctgcccaaatccatcgaaaactacagccaggaaatcggccgcgccgggcgtgac
gggcaaccctcggattgcctggtgctcgccaaccgagacagcctcaatgtgctggaaaac
ttcgtgtacggcgacacgcccgagcaggagggcattcgccgtgtgctggacgagttgcag
gccgcgcgaggggacgggcagtgggagtttctgctgcgctcgctgtcggaccacagcaac
atccgcgagctgcccctcaagacgctgctggtgcagttggaactcaaaggcgtgattgcg
ccgcgctacgcgttttacgccgaataccggttcaagtacctgatcgagcccgacgccttg
ttggcgcggttttccggggagcggcaggcgtttgtcgcagcgatcgtccaggtgtgcaag
cgggccaagacctgggcgacggtggatttcgacacgctttatcaacagcaccaggccgag
cgcaatcgcgtggtgaaagcgctggattacttccaggagcagggcctgatcgagctggaa
agcaagcagatgacggaggtctacagcctgctgaataccgatttcgatccgcaggtgttg
agcgccgagttatacacaggcttcaagcaacacgaggtcacggaagtggcgcggattcac
gccatgctcgacctgttcgccaccgaacactgcctgggccagcgcctggcccgctatttc
ggtgatgaacatgcaccgcagcgctgcgggcattgttcggtgtgccacggccatgtcgcg
catttgccggcgccgccgagcctggcgccgcttgtggataaaaacttcatggggctgtgc
ggtgattttatccacaggcatcatgagtactgcggccaactgcccggcgccgaacggctg
acgcggttcctgggcggtatcagcgtgccgctgttcaccaagttgaaggcacgcggcatc
cctggttttgctgcgctggaggactacccctacgccgaggtacgcgagtgggccgaaacc
catttgaataacctgtaa
DBGET
integrated database retrieval system
