Pogona vitticeps (central bearded dragon): 110081297
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Entry
110081297 CDS
T05000
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110081297 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvt03019
]
110081297 (CNOT1)
Messenger RNA biogenesis [BR:
pvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110081297 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110081297 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
110081297
NCBI-ProteinID:
XP_020653538
LinkDB
All DBs
Position
Unknown
AA seq
2385 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIENPLHYQKSLKPSPHLFTQLSKVIK
LSKVQEVIFGLALLNSFNPDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRSIITQFGVGEVTAAQVARVLGMMART
HSGLADGIPLQSISAPGSGIWSDGRDKNDGTQTHTWNVEVLIDVLKELNPTLNFKEVTYE
LDHPGFQIRDSKGLQIVVYGVQRGLGLEVFPVDLIYRPWKHAEGQLSFIQYSLINPEVFC
FADYPCHSVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAAGMAS
LSLGGSAVPHTQSVPGFPPNLSSAFSTPQSPAKAFPPLSTQNQNTPFSGIGGLSSQLPVG
GLTTGSLGIGTGALGLPAVNNDPFVVPRKLSTSGLNQPSFQQSKMKPSDLSQVWPEANQH
FSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNVKREREVFNCMLRNLFEEY
RFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFTSKMYYFGIAALD
RFKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQ
AQAQAHVPAKTPLAGQVSTIVTTTATTTTTVAKTTITPVGRVSFKKDVPPSINTTNIDTL
LVATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKR
VSIEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHW
LGMITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPW
TMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSA
PKKDVKQPEELPPIATTTASTTPATSTTCTTTVPPQPQYSYHDINVYSLGGLAPHITLNP
TIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMR
IAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQREMMEQAAAQLAQD
NCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIR
LKVGGVDVKQLAVYEEFARNVPGFLPTNDSTQPTGILAQPMKQAWATDDVAQIYDKCMTE
LEQHLQSIPHTLTMNPQTQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADA
DLLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVN
MQQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHS
RGNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLRE
WVNLYHSAAAGRDSTKAFSAFVGQVELREREMHQQGILKTDDLITRFFRLCTEMCVEISY
RAQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVV
GVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKA
PGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELAKPMQIL
YKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLK
VDMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYN
IQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIA
NQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIK
NPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7158 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctatctagtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcacattgtgaatcggcacggc
cccgaggcagacaggcatttactacgctgtctattctcacatgtggattttagtggcgat
ggtaaaagcagcggcaaagatttccatcagactcaatttctgatccaggagtgtgcatca
ttgattacgaagccaaattttatttcaacgttgtcctatgctattgaaaatccattgcac
tatcagaagagtcttaagccgtcaccccacctttttactcaactgagcaaagttatcaaa
ttaagcaaagttcaagaggttatttttggccttgctttgttgaactctttcaacccagac
ctaagaggttttgcggctcagtttattaaacagaaacttcccgatcttctgcgttcatat
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagacattgccatagaggtg
ctgcaccttctcctctcccaccttctttttgggcagaaaggagccttcggggttggacag
gaacaaattgacgcttttctcaaaacattacgtagagattttccccaggaacgttgcccc
gtggtgcttgcaccactcctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagcaaaaacaatgatggagagttctctggcagacttcatgcag
gaagttggctatggcttttgtacaagtgtggaagaatgtcgcagtatcatcacacagttt
ggggttggagaggtcacagctgcacaggttgccagggttttgggaatgatggctcgtaca
cactcaggattggctgatggaattcctttacagtccatctctgctcccggaagtggaatt
tggagtgatggaagagataaaaatgatggaacgcaaacccatacatggaatgtggaagtt
ttaattgatgtgcttaaggaactgaacccaactttgaacttcaaggaagttacgtatgaa
ctagaccatcctggatttcaaattcgtgatagcaagggcttgcagatcgtggtgtatggt
gtccagagagggttgggattggaagtatttcctgttgacctcatatatagaccttggaaa
catgcagaaggccagctctcatttatccagtactccctcatcaaccctgaggtcttctgt
tttgctgactacccctgtcatagtgttgccacagatattttgaaagcaccccctgaggat
gacaatcgagaaattgccacatggaagagcctggacttgattgagtcgctattgcggctg
gcggaggtggggcagtatgagcaggtgaagcagctcttcagcttcccgatcaagcactgt
ccagatatgctggtattggctttactacagatcaacacctcctggcacactttgcgacat
gaactcatctccacacttatgcccattttccttggcaaccaccccaactctgccatcatc
ctgcattatgcatggcatgggcagggtcagtctccttcaattcgccagcttatcatgcat
gctatggcagaatggtacatgagaggggagcagtatgaccaagcaaagttatcacgtatt
ctagacgtggcccaagacttgaaggcgttgtccatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaactagacaagtgg
ctcacagataaaattcgggagcatggggagcctttcatccaagcctgcatgactttctta
aagagaagatgcccctccatcttggggggccttgccccggagaaagaccagcccaaaagt
gctcagctcccgccagagacgctggccaccatgctggcttgccttcaggcttgtgcagga
agcgtgtctcaggagctgtcggagactattctcaccatggtcgccaactgcagcaacgtc
atgaacaaagctaggcagccgccacctggagtgatgcccaagggacgtccgcccagtgct
agcagcctagatgccatctctcctgtacagattgatccccttgctgctgggatggcatct
ctgagtttaggtggctcagcggtcccacacacgcagagcgttccaggttttcctccgaac
ttgagttcagcctttagtactcctcagtctccagcaaaggcctttccgccactttccact
caaaaccagaacacacctttcagtgggattggcggcctgtcctcgcagcttccagtaggt
ggtcttacgacaggcagcctggggattgggacaggggccctcggccttcccgctgtgaat
aatgacccgtttgttgtgccaagaaaactgagtacatcaggactgaaccagccttcattc
cagcagagtaagatgaaaccttctgacttatctcaggtatggcccgaggcaaatcagcac
tttagcaaagagattgatgatgaagccaatagctattttcagcgtatttataatcaccca
ccacatccgactatgtctgtagatgaggtcttagaaatgctgcagaggtttaaggactcc
aacgttaaacgggaacgcgaagtgtttaactgtatgctgaggaacttgtttgaggagtac
cgttttttcccccagtaccccgataaagagctgcacataaccgcctgcctctttggtggg
atcatagagaaaggactggtgacttacatggccctgggcctggccttgcgctatgttctt
gaagccttacgaaagccttttacgtccaaaatgtactatttcggcattgctgcactagat
aggtttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagt
cactttatacagttcccgcatcacctgcaggagtatattgaatatgggcagcagtcccga
gaccctcccgtgaagatgcagggctccatcaccacccctggaagtattgcactggcccag
gctcaggcccaggcccacgttccggcaaaaactcctcttgccggccaagttagcactatc
gtcaccaccaccgccaccaccaccaccaccgtggccaagacgaccatcacccccgtgggt
cgggtcagcttcaagaaggatgtgccaccttctattaatacaaccaacattgatacccta
ctagtagccacagatcaaaccgagagaattgttgaaccccctgaaaatgtgcaggaaaag
attgctttcatcttcaacaacctgtctcagtcgaacatgactcagaaggtggaggagctg
aaggaaacggtgaaagaagaattcatgccttgggtctcgcagtaccttgtaatgaagagg
gttagcatcgagccaaacttccacagcctttattcgaatttccttgacacgctgaagaac
cccgagttcaacaaaatggttctgaatgaaacctaccgaaatatcaaggtgctactcact
tcagacaaagctgctgccaacttctccgaccgttccctgctaaagaacctgggccactgg
ctggggatgatcacgttggctaaaaataaacccatcttgcacacggacttggatgtgaaa
tccttgctgctggaagcttatgtcaaaggtcagcaggagctcctctacgttgtgccattt
gttgccaaagtcttggaatccagtgtaagaagcgtggttttcaggcctcccaacccgtgg
accatggcaattatgaatgtactagcagagctgcaccaggaacatgacttaaaactgaat
ctgaagtttgaaatagaagttctctgcaagaatcttgcgcttgacatcaatgaactcaaa
cccgggaaccttctgaaagacaaggatcggttgaaaaatctggatgaacagttatctgct
ccaaagaaagacgtgaaacagccggaagagttgccccccattgcaaccaccactgcttct
acaaccccagcaaccagcactacctgcacaactacagttcctccacagccgcaatacagc
taccacgacattaatgtttactctctgggaggcctagcgccacacatcactctaaatcca
acaataccccttttccaggcccacccccagttaaagcagtgcgtccggcaagccattgaa
cgtgcggtccaagaactcgttcatccggtggtggatcggtccattaagatcgccatgact
acttgtgagcagatcgtgagaaaggattttgcactagactcggaggagtcgcgcatgcgt
atagcagcccaccacatgatgcgaaacctgacagccgggatggccatgatcacctgcagg
gagcctttgttgatgagcatcgcgaccaacttgaagaacagctttgccactgctttgcgg
gcagcttcgccacagcagagggagatgatggagcaagccgctgcccagctggctcaggat
aactgtgaactggcctgttgtttcattcagaaaacagcggtggaaaaagcaggtcctgaa
atggataagaggctagccactgaatttgagctcaggaaacacgcaaggcaggagggtcgt
cggtactgtgatccagtggtattgacctaccaagctgaacggatgccagaacagatcaga
ttgaaggttggcggtgtggacgtaaagcagctagctgtatatgaggaatttgctcgaaat
gtccctggtttcttaccgaccaatgattccacccaacccacaggaatcctggctcaacca
atgaagcaagcctgggcgactgacgacgtcgcccagatctacgataagtgtatgacggaa
ctcgagcagcacctgcaatccattcctcacaccctgaccatgaatccgcagactcaagcc
ttacgaagcctcttggaagccgtggtggtagctcgtaactcccgtgacgccatcgccgcc
ctggggctgctgcagaaggccgttgaaggcttgttagatgccaccagcggggcagacgcc
gacctcctcctccgttaccgggagtgccacctgcttgtgctgaaagcattgcaggatggc
cgtgcctacgggtctccgtggtgtaacaagcagattacaagatgtctgattgagtgccgc
gatgagtataagtacaacgtcgaagcagtggagttactgatccggaaccatctcgtgaac
atgcagcagtacgacctccacttggctcagtccatggagaatggcttaaactacatggca
gtggcgttcgccatgcagctggtgaagatcctgttggtggatgagcggagtgttgctcac
atcacagaagctgatctcttccacaccattgagaccctgatgaggattaacgctcactcg
agagggaacgcgcctgaagggttgccccagctgatggaagtggtccggtctaactatgaa
gccatgattgatcgtgctcacggagggccaaacttcatgatgcactctgggatttctcaa
gcctccgagtacgacgaccctcctggcctgagggagaaggcagaatatctgctgagggag
tgggtgaacctctaccactcagccgcagccgggcgtgacagcaccaaagccttctcggcc
tttgttggacaggtagagcttagggagagagagatgcatcagcaaggaatcctgaaaacc
gatgacttgatcacaaggttctttcgcctttgcactgaaatgtgcgtggagatcagctat
cgggcacaagctgagcagcagcataacccggcggcaaaccccaccatgatccgtgccaag
tgctaccacaatctggatgcctttgtgcgcctcatcgcgctgctggtgaagcactcgggg
gaggcgaccaacaccgtcacaaagatcaacctgctcaacaaggttcttgggattgtggtg
ggagtccttctccaggaccatgatgttcgccaaagtgaatttcagcagctcccctaccac
cgcatcttcatcatgttgctgttagaattaaatgctcctgaacacgtcctggaaaccata
aatttccagacactcacagccttctgcaacacctttcacatcctgagacctacgaaagct
ccaggttttgtttatgcttggctagaattgatctcgcatcggatatttattgcaagaatg
ctggcccatacaccacagcagaagggctggcccatgtacgcacagctattgattgatctg
tttaaatatttggctcctttcctgagaaacgtggaactcgccaagcctatgcaaattctg
tacaagggtactctgcgtgtgctgctggtcctgctacatgatttcccggagttcctgtgt
gactaccactacggattctgtgatgtgattcctccaaactgtatccagctaaggaatttg
atcttgagtgcctttcctcgcaatatgagacttccggatcccttcactcccaaccttaag
gtggatatgttgagcgagatcaatattgctccccggatactcaccaacttcaccggcgtg
atgccccctcagttcaagaaggacttggattcctatctcaaaacccgctctcccgtcacg
tttctgtccgacttgcgcagcaacttgcaggtgtccaatgagcccgggaatcgctacaac
atccagctgatcaacgcactggtgctgtacgttggcactcaggccattgcccacatccac
aacaagggcagcaccccctccatgagcaccatcacccactcggctcacatggatatcttc
cagaatctggctgtggatttggacacagaaggccggtacctcttcttgaacgcgattgcc
aatcagctgcggtacccaaacagtcatacccactattttagctgcaccatgctctactta
tttgctgaggccaacaccgaagccattcaggagcagatcaccagagttctgttagaacga
ctgattgtaaataggcctcacccatggggactgctaattactttcattgagctgattaaa
aacccagcatttaagttctggaaccatgagtttgttcactgtgcgccagaaattgaaaag
ctgttccagtctgtcgcacagtgttgtatggggcaaaagcaggcacagcaggtaatggaa
ggaactggtgctagttag
DBGET
integrated database retrieval system
