KEGG   Phaseolus vulgaris (common bean): PHAVU_004G166200g
Entry
PHAVU_004G166200g CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03020  RNA polymerase
pvu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PHAVU_004G166200g
  09124 Replication and repair
   03420 Nucleotide excision repair
    PHAVU_004G166200g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvu03021]
    PHAVU_004G166200g
   03400 DNA repair and recombination proteins [BR:pvu03400]
    PHAVU_004G166200g
Transcription machinery [BR:pvu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     PHAVU_004G166200g
  RNA polymerase III system
   RNA polymerase III
     PHAVU_004G166200g
  RNA polymerase I system
   RNA polymerase I
     PHAVU_004G166200g
DNA repair and recombination proteins [BR:pvu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PHAVU_004G166200g
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat
Other DBs
NCBI-GeneID: 18633281
NCBI-ProteinID: XP_007152860
UniProt: V7C3Z8
LinkDB
Position
4:44755799..44757523
AA seq 207 aa
MVLTDEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKS
KKDNSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISS
KFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYY
GLKRGQVVKIIRPSETAGRYVTYRFVV
NT seq 624 nt   +upstreamnt  +downstreamnt
atggtgcttacggatgaagaaatatctcggctgtatagaataaggaagacggtgatgcat
atgctgagagacagaggttaccttgtcggagacttcgagatcaacatgtcgaagcacgag
tttaaatccagtcatggaggagagaacatgaagcgtgaagacctcgacctcaacaagtcc
aagaaggataactcctccgaccagatctacgtcttcttcccggacgaggccaaggtcggc
gtcaaaaccatgaagacatacactaatcgcatgaacaacgacaacgtctacagagccatt
ctcgtcactcagaccaatctcacccccttcgccagaacctgcgtcagcgaaatctcctcc
aaatttcacttggaggtttttcaggaggcagagctgcttgtgaatattaaggagcatgaa
cttgtccctgaacatcaggttctcactgatgctgagaaaaaaaccttgattgagagatac
actgtcaaagaaactcagctacctaggattcaggtgacagatcctgttgcaagatattat
ggattgaaacgtggtcaagttgtgaagattattcggccgagtgaaactgctggaagatat
gttacatatagatttgttgtataa

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