Phaseolus vulgaris (common bean): PHAVU_011G100500g
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Entry
PHAVU_011G100500g CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03030
DNA replication
pvu03410
Base excision repair
pvu03420
Nucleotide excision repair
pvu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PHAVU_011G100500g
03410 Base excision repair
PHAVU_011G100500g
03420 Nucleotide excision repair
PHAVU_011G100500g
03430 Mismatch repair
PHAVU_011G100500g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvu03032
]
PHAVU_011G100500g
03400 DNA repair and recombination proteins [BR:
pvu03400
]
PHAVU_011G100500g
DNA replication proteins [BR:
pvu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PHAVU_011G100500g
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PHAVU_011G100500g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
AAA_19
DNA_pol3_delta
Rad17
AAA_30
nSTAND3
BRCT_2
Gp44_lid
Sigma54_activ_2
RuvB_N
AAA_5
AAA_assoc_2
AAA_33
RNA_helicase
AAA_14
TsaE
AAA_18
NTPase_1
RsgA_GTPase
AAA_16
AAA_17
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
18615725
NCBI-ProteinID:
XP_007132512
UniProt:
V7AK64
LinkDB
All DBs
Position
11:10916368..10927507
Genome browser
AA seq
938 aa
AA seq
DB search
MSDIRKWFMKSHDKGNNAAPSKPSNQPKPSSDKPQPEKNVAGGQESSGRRVTSKYFNTNK
QKVKEEKETQELPAKRKNVKDSEDTPEPKRVHEDVGDDSVLPTNKKKLAEATPTKKLKSG
SGRGIPKKSVVLEESDEDDDKGAVSAVKSAGRGGGGRGAPGRGRGGGRGGFMNFGERKDP
PHKGEKEVPEGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCD
EDIGGRKSEKAKELGTSFLTEDGLFDMIRASKPAKSPSQAEKKPVNKAVAVAPKVSPKPL
VKVPLSSRSPSKQAKPVAATTIESSVMWTEKYRPKDPKDIIGNQSLIVQLRNWLKAWNEQ
FSDTGNKKKGKKQNDSVLKKAVLLSGTPGIGKTTSAKLVCEQLGFQAIEVNASDSRGKAD
SKIEKGISGSKTNSVKELVTNESIGANMERSKISKSVLIMDEVDGMSAGDRGGVADLIAS
IKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMDVAKAEGLQVNEIAL
EELAERVNGDVRMAVNQLQYMSLSMSVINYDDIRQRFLTNAKDEDISPFTAVDKLFGFNA
GKLRMDERINLSMSDPDLVPLLIQENYINYKPSLAGKDDNGIKRMNLIARAAESIADGDI
VNVQIRRYRQWQLSQASCTATCIIPASLLHGQREILEQGERNFNRFGGWLGKNSTMGKNF
RLLDDLHVHILASRESSSGRDTIRMEYLTLILKRLTEPLRTLPKAEAVQQVVEFMNTYSI
SQEDFDTIVELSKFKGHPNPLDGIQPAIKSALTKAYKEQSKSRVVRVADQITLPGVKKAP
KKRIAAILEPAEEGGEKGEGDTSDQSEEENTSDTEELEGIAKGEKLQSDLQSWNSKATEV
QLELKGTGNSSAKKASGGRGKAASTSGKKAAQAPKRKR
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatataaggaagtggttcatgaaatcacatgacaagggaaacaatgccgctccc
tccaagccttccaatcaacccaagccttcttcggataaaccccagcccgagaaaaatgtg
gctggaggtcaagaaagttcagggaggagggtaactagcaaatattttaacacaaacaag
caaaaggtgaaagaggagaaggaaacgcaggagttacctgctaaaagaaagaatgtgaag
gacagtgaagatacaccagagcctaagagagttcatgaagatgttggagatgattctgtc
ttgcccaccaataaaaagaagttagctgaggccactccgacaaaaaaattgaagagtgga
tcaggtcggggtattcccaaaaaatctgtagttttggaagaaagtgatgaagatgatgac
aaaggtgctgtttctgctgttaaatctgctggaaggggtggtggtggaagaggagcacct
gggagaggtagagggggcggtaggggtggattcatgaattttggagaaagaaaagatccc
ccacacaaaggagaaaaggaagtccctgaaggtgctcctaactgtttagctggcttgact
tttgtgatcagtggaacactggatagtttggaacgtgaagaagctgaagatttgattaaa
cgccatggtggccgtgtcactggatcagtcagcaagaaaacgaattatctgttatgtgat
gaagatattggggggcggaagtctgaaaaggccaaagagctaggaacgtccttcctcacg
gaggatggattgtttgatatgattcgtgcatcaaaacctgctaaatctccttcacaagca
gaaaagaaacctgtgaataaggctgttgcagtagcaccaaaagtttctccgaaaccccta
gttaaggttcctctgtcttcacgctcaccttctaagcaggctaagccagtggctgctact
actattgaatcttctgtgatgtggacagagaaatatcgacctaaagatccaaaggatatc
atagggaaccagtcacttattgttcaacttcgtaattggttgaaagcttggaacgagcaa
ttttcagacactggtaacaaaaaaaagggaaaaaagcaaaatgactctgttttgaaaaaa
gctgtcttgttaagtggaacccctggtatagggaaaacaacttcagcaaagttggtctgt
gagcagcttggtttccaagccatagaggtaaatgctagtgatagccgtggaaaagctgat
agcaaaattgagaaaggaattagtggaagcaagacaaattctgttaaggagcttgtaacc
aatgagtctattggtgctaatatggagcggtccaagatttccaaatctgtgctcattatg
gatgaggttgatgggatgtcagctggtgataggggtggtgttgctgatcttattgctagc
attaagatatcgaaaattcctattatctgcatttgcaatgaccgttacagccagaaactt
aaaagccttgtgaactactgtttgcttctaagttttcggaagcctacaaagcaacagatg
gcaaagaggttgatggatgttgcaaaggctgaaggccttcaagttaatgagattgcactt
gaggaactagcagaaagagttaatggggatgtgcgaatggcagtaaaccagttacagtat
atgagcctctctatgtctgttatcaactatgatgacattagacaacgctttcttaccaat
gcaaaggatgaagacatttcaccattcacggctgttgataagctttttggttttaatgct
gggaagttgagaatggatgagaggataaatcttagcatgagtgatcctgatcttgttcct
cttcttattcaggaaaattatattaattataaaccaagcttggctggtaaggatgacaat
ggcataaaacgcatgaacctgattgcccgtgctgctgagtctattgctgatggggatata
gtgaatgttcagattcgcagatatcgacagtggcagctctctcaagctagttgtacagca
acctgcataattcctgcatcattgttgcacgggcaaagagaaatacttgaacagggagaa
cgaaatttcaaccggtttggtggatggcttgggaagaactcgacaatgggcaaaaacttt
aggcttttggatgatcttcatgttcacattcttgcttctcgtgaatctagttcaggaagg
gataccattcgcatggaatatctcactcttattcttaaacgattgactgaacccctacga
accctgcctaaggctgaagcggttcaacaagttgtggaattcatgaatacatactctatc
agtcaggaagattttgatactatagtagagttatcaaaattcaagggtcatcctaatcca
ctagatggcatacagcctgccattaagtcagctttgacaaaagcctacaaagagcaaagc
aaatctcgggtggttcgagttgccgaccaaataacacttcctggtgtaaagaaggcccct
aagaagcggattgctgctatacttgaaccagccgaggaaggaggcgaaaaaggggaaggt
gacacctcggaccagagtgaagaagagaacacgtctgatacagaagagctggaaggcatc
gccaagggcgagaagctgcaatccgatcttcaaagctggaattcaaaagccacggaagta
cagttggaactgaagggaacgggtaattcaagtgccaagaaggcatcgggtggtagaggt
aaagctgcttctacatctgggaagaaggctgctcaagctccaaaaagaaaaaggtga
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