KEGG   Plasmodium vinckei vinckei: PVVCY_1003000
Entry
PVVCY_1003000     CDS       T08061                                 
Name
(RefSeq) ubiquitin fusion degradation protein UFD1, putative
  KO
K14016  ubiquitin fusion degradation protein 1
Organism
pvv  Plasmodium vinckei vinckei
Pathway
pvv04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pvv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    PVVCY_1003000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pvv03009]
    PVVCY_1003000
Ribosome biogenesis [BR:pvv03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    PVVCY_1003000
SSDB
Motif
Pfam: UFD1_N1 UFD1_N2 CDC48_2 FANCA_CTD
Other DBs
NCBI-GeneID: 19960286
NCBI-ProteinID: XP_008623967
UniProt: A0A449BU61
LinkDB
Position
PVVCY_10:join(1105107..1105109,1105212..1105341,1105564..1105649,1105765..1105833,1105941..1106071,1106193..1106286,1106408..1106480,1106573..1106613,1106787..1106912,1107011..1107094)
AA seq 278 aa
MWSFNNLNNFLGNDFLNISEPFTEEYTCYPVSFIGKDDMENGNKIILPQTALNALARRHI
SWPMLFEVSNPYTEKRTHSGVLEFISDEGTCHMPYWMMQQLCLKEGDIVRVTSVSLPKGT
FVKLKPCSKDFMELSNHRTVLETALRNYATLTIGDNIVIHYLGKTYEIKIVDLKPAFACT
IIETDVEVEFEEPFEKVQYVEEVIPVEESKFKGKGQRTDGKACKNLKKEKVRQKVIENPE
PWKEKLVGGVRTKCAEYEDLLKKGRIPGIIGKFIERKP
NT seq 837 nt   +upstreamnt  +downstreamnt
atgtggagttttaataatttaaacaattttttgggaaatgattttttaaatatatctgag
ccctttactgaagaatatacatgctatccggtatcttttattggaaaagatgatatggaa
aatggaaacaaaattatattgccacaaactgccttgaacgcattggctagaagacacata
tcatggcccatgttatttgaagtgtccaatccatatacggaaaagagaactcacagtggt
gttcttgaattcatttccgatgaaggaacatgccacatgccatattggatgatgcaacaa
ttatgcctaaaagaaggagatatagtgagggttacaagtgtaagtctacctaaaggtacc
tttgtcaagttgaaaccctgttctaaggattttatggaattatctaatcatcgaactgtt
ttagaaacagctttaagaaattatgcaacactaactattggtgataatattgtgatacat
tatttgggaaagacttatgaaattaaaattgtggatttaaaaccagcttttgcttgtact
attattgagactgatgttgaagtagagtttgaggaaccatttgagaaggtgcaatatgta
gaagaagtcatacccgttgaggaaagtaaattcaaagggaaagggcaaagaaccgatgga
aaagcttgtaaaaatcttaaaaaagaaaaagtacgacaaaaagttattgaaaatcctgaa
ccatggaaagagaaacttgttggcggtgttaggaccaaatgtgctgaatatgaagatcta
ctaaaaaaaggacgtattcctggaataataggaaaatttatagaaaggaagccttaa

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