Pseudomonas vanderleydeniana: HU752_029265
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Entry
HU752_029265 CDS
T07587
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pvw
Pseudomonas vanderleydeniana
Pathway
pvw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pvw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HU752_029265 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvw03021
]
HU752_029265 (rpoA)
03400 DNA repair and recombination proteins [BR:
pvw03400
]
HU752_029265 (rpoA)
Enzymes [BR:
pvw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HU752_029265 (rpoA)
Transcription machinery [BR:
pvw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HU752_029265 (rpoA)
DNA repair and recombination proteins [BR:
pvw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HU752_029265 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
QXI27932
UniProt:
A0A9E6PKE7
LinkDB
All DBs
Position
complement(6514227..6515228)
Genome browser
AA seq
333 aa
AA seq
DB search
MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLSKKGSGVVTAADIQLDHD
VEIVNPDHVIANLASNGALNMKLTVARGRGYEPADSRQSDEDESRSIGRLQLDSSFSPVR
RIAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttcggtaaatgagttcctgacaccccgtcacattgacgtgcaggttgtcagt
ccaacccgcgctaagatcactctcgagcctctcgagcgtggttttggccacaccctgggc
aacgcgctgcgccgcatcctgttgtcctcaatgccaggctgtgcagtagtcgaggccgag
attgacggtgtgctccacgagtacagcgccatcgaaggtgtacaggaagatgtcattgaa
atcctgttgaaccttaaaggtctggctatcaagctgcacggccgtgacgaagttacgctg
accttgtcgaagaagggttcgggggtggttaccgctgccgatattcagctggatcatgat
gtcgagatcgttaaccccgatcacgtaatcgccaacctggcgtccaatggcgccttgaac
atgaagctcaccgtagctcgtggtcgtggctatgaaccagcagactcgcgtcagagcgat
gaagacgaaagccgcagcatcggtcgcttgcagctcgactcttcgttcagcccggttcgc
cgtatcgcctacgtggtggaaaacgcccgtgtcgaacagcgtaccaacctggacaaactg
gttattgatctggaaaccaacggtaccctggatcctgaagaggccatccgtcgtgctgca
accatcctgcaacagcagttggctgcgttcgtcgacctcaagggtgacagtgagccagtg
gttgtcgaacaggaagacgagatcgatccgatcctgcttcgcccggttgacgatctggaa
ctgactgtacgttcggctaactgccttaaggcggaaaacatctactacatcggcgacctg
attcagcgtaccgaagtagagctgttgaagactccgaacctgggcaagaaatccctgact
gaaatcaaggatgttctggcctcccgcggtctgtccctcggcatgcgcctcgataactgg
ccgccggcaagtcttaagaaggacgacaaggcgactgcctga
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