Plasmodium vivax: PVX_087010
Help
Entry
PVX_087010 CDS
T01073
Name
(RefSeq) DNA excision-repair helicase, putative
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pvx
Plasmodium vivax
Pathway
pvx03022
Basal transcription factors
pvx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pvx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PVX_087010
09124 Replication and repair
03420 Nucleotide excision repair
PVX_087010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvx03021
]
PVX_087010
03400 DNA repair and recombination proteins [BR:
pvx03400
]
PVX_087010
Enzymes [BR:
pvx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PVX_087010
Transcription machinery [BR:
pvx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PVX_087010
DNA repair and recombination proteins [BR:
pvx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PVX_087010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
ResIII
DEAD
AAA_11
AAA_7
nSTAND3
AAA_19
Motif
Other DBs
NCBI-GeneID:
5471221
NCBI-ProteinID:
XP_001608346
UniProt:
A5KEA4
LinkDB
All DBs
Position
7:1300742..1303867
Genome browser
AA seq
1041 aa
AA seq
DB search
MVVFQLDDLEVFFPYDYIYPEQYAYMRYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSY
QHGKNDEGKFIFCTRTVAEMEKSLIELKKVIQYRVDTLRRRVVSGEVKGERADERAEDEM
KDQTGEQTTANDANDANDANQANDATTANHANDATAAQRRSGDLQGDILAIGISARRCMC
VNERVLRKHEREKIDEECRKLTATFVREKKYISQRISKLGSTHSDRVSEFIVKNRQHIDV
EDYFDIYHTRNSLEEYNDIGLCGYYENYKKEFLFELIQPGVYTIEDLKVMCKRYKNAQNE
TVPICPYFCAKKVIEVAKVIVLNYQYVIDPKVSKSLFIGREVNSRVNLHKRDIIVFDEAH
NIDSVCLEALSVNIDRNVLNKATANIKKLLSKIEASKVLNEEKLREECTRILRRVREEKR
GGEALGEAMSEAVKEAVGEAANEAANEAVKEALTEAGSGGGAPGKRRPQESKGAEVYFDE
DLNLIFPRAANPSGVDDDAPWGGKQAKGGGLLEGLAKFLGQSVSSLLPGGSGQVAGSSLL
PGGSGQVADSSLFPEGSKDSHGNGSSSSAAAANAATPREDPTELHYSPLLMEDAVKNVVL
PGNIRKSEHFLNLMRIVVMYLRKYVNIYEVTSEGPLSFLYKCERETKLDTSFFKFCFDRL
KALLNALQIVTVDDYSALNVVCNFCTLLGSYFQGFIIICEPYPEATGIYDPVIQFACLDS
SIAMKAVIGKYRSVILTSGTITPLELYPKLLNFKTVLTASFPMSFDRNCVCPLIVTNSSD
LVPLSSQFSLRSDLTVIKNYGMLLVEMCKTIPDGIVAYFPSYIYMEEVISSWYELGIITS
ILECKLIFIETKDIVSTTIALHNFKRACDLGKGAVFLSICRGKIAEGIDFDKHYGKCVIL
FGIPYQYTLSRILKSRLDFLKETYNIQENEFLTFDAMRQASQCVGRIIRNKKDYGIMIFA
DIRYARNDKKSKLPPWIIKCMELSNVNLTVSTAVNISRKFLLNMSQEYKETGQTKLSQEL
TSDQPRCWALVKSALNLDDFL
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgttccagctggacgacctggaggtgttcttcccgtatgactacatctacccg
gagcagtacgcgtacatgaggtacctgaagaagacgctggacagcgaggggcactgcgtg
ctggagatgcccaccggcacggggaagacggtggcgattttctcgctgataacgtcctac
cagcatgggaagaacgacgaggggaagttcattttctgcacgcgcacggtggccgagatg
gagaagtcgctcatcgagctgaagaaggtcattcagtaccgggtggacacgctccgccgt
cgcgtggttagcggcgaggtgaagggggagcgggcggatgaacgggcggaggacgagatg
aaggatcagacgggggagcaaaccaccgctaacgatgctaacgatgctaacgatgctaat
caagctaacgacgctaccaccgctaaccacgctaacgacgctaccgccgctcagagacgc
agtggtgacctgcagggggacatcctcgccatcggaatcagcgcgcggaggtgcatgtgt
gtgaacgagcgggtgctgcgcaagcacgagcgcgagaagatagacgaggagtgccgcaag
ctgacggcgaccttcgtccgggagaagaagtacatcagccaacggataagcaaattgggg
agcacccactcagatagggtctctgaattcatagtaaagaacagacagcacatagatgtg
gaagattattttgacatctaccacacgaggaactccttagaagagtataacgacataggg
ttgtgtggatattacgagaattataaaaaggagttccttttcgagctgatccagccgggg
gtatacacgattgaagatttgaaggtgatgtgtaaaaggtacaaaaatgcccagaatgag
accgtgccgatttgcccctacttttgcgcgaagaaagttatagaggtggccaaggtgatc
gttttaaattaccaatatgtgattgacccgaaggtatcaaagtcgctattcattgggagg
gaggttaacagccgggtgaatctacacaagagggacatcatcgtttttgatgaggcgcat
aacattgatagcgtgtgcctggaggcgctgagtgtaaacatagaccggaacgtcctcaac
aaggccacggcaaatattaagaagctgctcagcaagatcgaggcctccaaggtcctcaac
gaggagaagctccgcgaggagtgcacccgcattttgcggcgcgtccgggaggagaagcgg
ggcggcgaagcgttgggcgaagcgatgagcgaagcggtgaaagaagcggtgggggaagcg
gccaacgaagcggccaacgaagcggtgaaagaagccttgacagaggctggctcagggggg
ggcgcccccgggaagaggaggccccaagaaagcaaaggggcagaggtctactttgatgag
gacctaaatttgatttttcccagggcggcgaatccctccggcgtggacgacgatgcgccc
tggggggggaagcaggcgaagggagggggccttctggaggggttagcgaagtttctgggt
cagtcagttagcagtctcctcccggggggaagcggccaagtggcaggtagcagtctcctc
ccggggggaagcggccaagtggcagatagcagtctcttcccggaggggagcaaagactcg
cacggtaatggcagtagtagtagtgccgccgccgctaacgcagctaccccgcgagaggac
ccgacggagctgcactacagcccgctcctgatggaggacgcggtgaaaaacgtggtgctg
ccggggaacatccgcaagtcggagcacttcctaaacctcatgcggatagtcgtcatgtac
ctgcggaagtatgtcaatatttacgaagtcacctcggaaggtcccctctccttcttgtat
aaatgtgaaagggagaccaaactggacacctccttcttcaaattctgtttcgatcgtctg
aaggctcttctaaacgctctgcagattgttaccgtggatgactactccgccttaaatgtg
gtgtgcaatttttgcacccttctggggagctacttccaagggtttatcatcatatgtgag
ccttaccctgaggccacaggcatctacgacccggtgattcagttcgcctgtcttgactcc
tccatagcaatgaaggctgttataggcaaatacagatctgtaattttaactagtgggacg
atcacccctttggagttgtaccccaaattgctaaacttcaaaactgtgttgactgcctcc
ttccctatgtcattcgataggaactgtgtgtgtcctttgatagttacgaacagttcggat
ctggtcccgttgtcttcccagttttctctacgaagtgaccttacggtgattaagaactac
ggcatgctgctggtcgagatgtgcaaaacgattcccgatgggattgttgcgtacttccca
tcgtacatctatatggaggaggtcatctcctcttggtatgaactcggcatcatcaccagc
atcctcgagtgtaaattgattttcattgaaacgaaggatattgtatccaccaccattgcg
ctgcataactttaagagggcgtgcgacttggggaagggggccgtcttcctctccatttgc
cgtggaaaaatcgcagaagggatcgacttcgataaacactatggcaaatgcgtgatcctc
tttggcatcccctaccagtataccctctcgaggatcctcaaatcgaggctggactttcta
aaagaaacgtacaatatccaggagaacgagtttcttacgttcgacgcgatgagacaggcc
tcccagtgcgtcgggagaatcatacgaaacaagaaggactacgggataatgatcttcgcg
gacattcggtacgcacgtaatgataagaagagcaagctgccgccctggatcatcaagtgc
atggagctgagcaacgtgaatctcaccgtcagcacggccgtcaacatctcgcgcaagttc
ctcctcaacatgtcccaggagtacaaggagactggccagaccaagctctcgcaggagctc
acgtccgaccagccccgctgctgggccctcgtcaagtcggcgctcaacctcgacgacttc
ctctga
DBGET
integrated database retrieval system
