Pistacia vera (pistachio): 116108213
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Entry
116108213 CDS
T07386
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy00040
Pentose and glucuronate interconversions
pvy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116108213
Enzymes [BR:
pvy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116108213
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
116108213
NCBI-ProteinID:
XP_031250340
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MAVTQRGVCLCLAVVLMFFVGVLATVRNDDLSVSRKVKTEQLQSLTNSTMAARSEDDDVH
AHAVNNPEEIAAEVEMSIRNSTERRQLGYFSCGTGNPIDDCWRCDPNWQKNRKRLADCGI
GFGRNAIGGRDGRFYVVTDHTDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELI
MNSFKTIDGRGVNVHIANGGCITIQYVTNVIIHGLHIHDCKPTGNALVRSSPSHYGWRTM
ADGDAISIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNHLTHHNEVMLLGHSDSY
TRDKNMQVTIAYNHFGKGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNR
YAAPTNPFAKEVTKRVDTESSQWKSWNWRSEGDLLLNGAYFTPSGAGASASYARASSLGA
KSSAMVGSMTSGSGALSCRRGRQCS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcggttactcaacgtggtgtttgtctttgcttggctgttgttctaatgttcttcgtc
ggagttctggcgactgtacggaacgatgatctctctgtttcaaggaaggtgaagacagag
cagttgcagagcttaaccaactcaacaatggccgccaggagtgaagacgatgatgtgcat
gcgcatgccgtgaataacccagaggaaattgctgcggaggttgaaatgagcatccgcaac
agcactgagaggaggcaattgggttacttctcgtgtgggactggtaatcctattgatgac
tgctggaggtgtgaccctaactggcagaagaatcgcaaacgccttgcggactgcggcatt
ggttttggaaggaatgccatcggtggtcgtgatggccgcttttatgttgtcactgaccac
actgatgacgatcctgttaacccccgacctggcactttgaggcatgctgtaatccaggac
agacctctctggattgtgttcaagagggacatggtgatcacattgaaacaggaattgatc
atgaatagctttaagaccattgatggtcgtggagtgaatgtacacattgctaatggaggg
tgcatcaccatccaatatgttaccaatgtcatcattcatggtctccatattcatgattgc
aaacccacaggtaatgcattggttaggagctcccctagtcactatggttggaggacaatg
gctgatggtgatgccatatccatttttgggtcaagccatatatgggttgatcacaattca
ctctccaactgtgctgatggacttgttgatgctgtcatgggttctactgcaattaccatt
tcaaataatcacttaacccaccacaatgaggtaatgttgctgggccacagtgattcttat
accagagacaaaaatatgcaagttacaattgcttacaaccattttgggaagggactgatt
cagagaatgccaagatgtagacatgggtacttccatgtagtgaacaatgactatactcac
tgggaaatgtatgccattggtggtagtgctaaccccaccattaacagccagggcaacaga
tatgctgctccaactaatccgtttgccaaggaggtaacaaagagggtggacaccgaatcg
agccagtggaagagctggaattggagatcagagggagacctcttgttgaatggtgcctac
ttcaccccatctggggcaggagcctccgctagctatgctcgcgcctcaagcttgggagcc
aagtcttccgcaatggttgggtccatgacttctggttctggtgcactttcctgccgcaga
ggccgacagtgctcctag
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