Pistacia vera (pistachio): 116114090
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Entry
116114090 CDS
T07386
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116114090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116114090
03012 Translation factors [BR:
pvy03012
]
116114090
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
116114090
Translation factors [BR:
pvy03012
]
Eukaryotic type
Release factors
116114090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
116114090
NCBI-ProteinID:
XP_031256103
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MADGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPSTSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVETLIVWENLDMNRYTLKNTTNNEVIIKHLNKEQETNQSSFRD
SGTNAELEVQEKMPLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
RTFDEFSDDGEVYGDSE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggtcacgagactgataaaaacattgagatatggaagattaagaagctaatc
aaagcacttgaggcagcaagaggcaatggaacaagcatgatttctcttatcatgcctccg
cgtgatcagattgcgcgtgtcactaaaatgcttggtgatgaatttggaactgcttcgaac
atcaaaagtagggttaatcgtcaatctgttttgggggccattacgtctgctcagcaaagg
ttgaagctttacaacaaggttcctccgaatgggcttgtgctttacacgggaacaattgtc
actgatgatggcaaggaaaagaaggtcactattgactttgagcctttcaggcctattaat
gcatctctttacctttgtgataacaagtttcatactgaagctctgaatgaacttctggaa
tctgatgacaagtttggttttattgtcatggatggtaacgggactctttttggtacacta
agtggaaacacacgtgaggtccttcataagttttctgttgaccttcctaagaagcatgga
agaggaggtcagtcagcactacggtttgctcggctccgtatggaaaagcgccacaactat
gtaaggaagaccgctgaacttgctacacagttttatatcaatccttccactagccagccc
aatgtttcaggactgatacttgctggttcagctgactttaaaactgagcttagtcagtct
gatatgtttgatccccgccttcaggcgaaaatcctgaatgttgtggatgtttcttatgga
ggggagaatgggtttaatcaggcaattgagttgtctgctgaaatcctttcaaatgtgaag
tttatacaagagaagcgcctgatagggaaatatttcgaagaaataagtcaggacactgga
aagtatgttttcggtgttgatgacacactgaaagctttggaaatgggtgctgttgagaca
cttattgtttgggaaaatctggatatgaataggtacactttgaaaaacaccaccaacaac
gaagttataataaaacacttgaacaaggagcaagaaacaaaccagagcagcttccgtgac
tctggcacgaatgctgaattggaggttcaggaaaagatgccacttctcgaatggtttgct
aatgaatacaggcgatttggttgcacacttgagtttgttaccaacaagtcgcaagaggga
tcccagttctgcagaggctttggtgggattgggggaatcctccgttaccagcttgatatg
aggacatttgatgagttttctgatgatggagaagtttacggtgattctgaatag
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